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    TRM17 GPI-anchored adhesin-like protein, putative (DUF3741) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816543, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TRM17
    Official Full Name
    GPI-anchored adhesin-like protein, putative (DUF3741)
    Primary source
    TAIR:AT2G20240
    Locus tag
    AT2G20240
    See related
    Araport:AT2G20240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F11A3.21; F11A3_21; TON1 Recruiting Motif 17
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    Genomic context

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    See TRM17 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (8727626..8730525, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene RNI-like superfamily protein Neighboring gene low-molecular-weight cysteine-rich 60 Neighboring gene Tetraspanin family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_127583.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    GPI-anchored adhesin-like protein, putative (DUF3741)
    NP_179614.1
    • Protein of unknown function (DUF3741); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3741 (InterPro:IPR022212); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3741) (TAIR:AT4G28760.2); Has 343 Blast hits to 303 proteins in 41 species: Archae - 0; Bacteria - 9; Metazoa - 36; Fungi - 24; Plants - 254; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8727626..8730525 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127583.5 → NP_179614.1  GPI-anchored adhesin-like protein, putative (DUF3741) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179614.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W066, A0A5S9WZJ9, Q67ZQ8, Q84X30, Q9SK77
      Conserved Domains (2) summary
      pfam12552
      Location:106 → 150
      DUF3741; Protein of unknown function (DUF3741)
      pfam14309
      Location:577 → 707
      DUF4378; Domain of unknown function (DUF4378)
    Nucleotide Protein
    Heading Accession and Version

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