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    DENN (AEX-3) domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833521, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DENN (AEX-3) domain-containing protein
    Primary source
    TAIR:AT5G35560
    Locus tag
    AT5G35560
    See related
    Araport:AT5G35560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MOK9.21; MOK9_21
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    20
    Sequence:
    Chromosome: 5; NC_003076.8 (13742072..13748318, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene O-fucosyltransferase family protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_122947.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DENN (AEX-3) domain-containing protein
    NP_568527.2
    • DENN (AEX-3) domain-containing protein; CONTAINS InterPro DOMAIN/s: uDENN (InterPro:IPR005113), dDENN (InterPro:IPR005112), DENN (InterPro:IPR001194); BEST Arabidopsis thaliana protein match is: DENN (AEX-3) domain-containing protein (TAIR:AT2G20320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      13742072..13748318 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344110.1 → NP_001330572.1  DENN (AEX-3) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BB75, A0A654G5D4, A0A7G2FBE6
      Conserved Domains (3) summary
      smart00799
      Location:429 → 613
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      pfam03455
      Location:701 → 737
      dDENN; dDENN domain
      pfam03456
      Location:160 → 236
      uDENN; uDENN domain

    2. NM_122947.4 → NP_568527.2  DENN (AEX-3) domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568527.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UKD1, A0A7G2FBE6, F4JZV9
      Conserved Domains (3) summary
      smart00799
      Location:455 → 639
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      pfam03455
      Location:727 → 763
      dDENN; dDENN domain
      pfam03456
      Location:160 → 236
      uDENN; uDENN domain
    Nucleotide Protein
    Heading Accession and Version

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