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    TOE3 target of early activation tagged (EAT) 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836853, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TOE3
    Official Full Name
    target of early activation tagged (EAT) 3
    Primary source
    TAIR:AT5G67180
    Locus tag
    AT5G67180
    See related
    Araport:AT5G67180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K21H1.22; K21H1_22; target of early activation tagged (EAT) 3
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    Genomic context

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    See TOE3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (26801949..26804271, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene SEC-C motif-containing protein / OTU-like cysteine protease family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DREB and EAR motif protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The miR172 target TOE3 represses AGAMOUS expression during Arabidopsis floral patterning. Jung JH, et al. Plant Sci, 2014 Feb. PMID 24388512
    2. Arabidopsis TOE proteins convey a photoperiodic signal to antagonize CONSTANS and regulate flowering time. Zhang B, et al. Genes Dev, 2015 May 1. PMID 25934507, Free PMC Article
    3. AINTEGUMENTA promotes petal identity and acts as a negative regulator of AGAMOUS. Krizek BA, et al. Plant Cell, 2000 Aug. PMID 10948255, Free PMC Article
    4. Control of Arabidopsis flower and seed development by the homeotic gene APETALA2. Jofuku KD, et al. Plant Cell, 1994 Sep. PMID 7919989, Free PMC Article
    5. Ethylene-inducible DNA binding proteins that interact with an ethylene-responsive element. Ohme-Takagi M, et al. Plant Cell, 1995 Feb. PMID 7756828, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001345814.1
    NM_001345815.1
    NM_001345816.1
    NM_126118.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in flower formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IC
    Inferred by Curator
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    target of early activation tagged (EAT) 3
    NP_201519.1
    • target of early activation tagged (EAT) 3 (TOE3); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT4G36920.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26801949..26804271 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126118.4 → NP_201519.1  target of early activation tagged (EAT) 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201519.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FH95
      UniProtKB/TrEMBL
      A0A5S9YHT4, A0A654GEU8
      Conserved Domains (2) summary
      smart00380
      Location:188 → 251
      AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
      cl00033
      Location:96 → 156
      AP2; DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor ...

    2. NM_001345814.1 → NP_001332132.1  target of early activation tagged (EAT) 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BG04, A0A654GEU8

    3. NM_001345815.1 → NP_001332130.1  target of early activation tagged (EAT) 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BFY4

    4. NM_001345816.1 → NP_001332131.1  target of early activation tagged (EAT) 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BFZ3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FH95.1

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