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    ARFA1E ADP-ribosylation factor A1E [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825402, updated on 18-Sep-2024

    Summary

    Official Symbol
    ARFA1E
    Official Full Name
    ADP-ribosylation factor A1E
    Primary source
    TAIR:AT3G62290
    Locus tag
    AT3G62290
    See related
    Araport:AT3G62290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ADP-ribosylation factor A1E; ATARFA1E
    Summary
    A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.
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    Genomic context

    See ARFA1E in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (23051544..23053893)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene tRNA-Phe Neighboring gene agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 7) Neighboring gene RNA helicase family protein Neighboring gene Polynucleotidyl transferase, ribonuclease H-like superfamily protein

    Interactions

    General gene information

    NM_001203232.1
    NM_001203233.1
    NM_116094.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTP binding PubMed 
    enables GTP binding PubMed 
    enables mRNA binding PubMed 
    enables phospholipase activator activity PubMed 

    General protein information

    Preferred Names
    ADP-ribosylation factor A1E
    NP_001190161.1
    • ADP-ribosylation factor A1E (ARFA1E); CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1).
    NP_001190162.1
    • ADP-ribosylation factor A1E (ARFA1E); CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1).
    NP_191788.1
    • ADP-ribosylation factor A1E (ARFA1E); FUNCTIONS IN: phospholipase activator activity, GTP binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase SAR1-type (InterPro:IPR006687), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT2G47170.1); Has 15041 Blast hits to 15022 proteins in 509 species: Archae - 14; Bacteria - 51; Metazoa - 7727; Fungi - 1941; Plants - 2031; Viruses - 3; Other Eukaryotes - 3274 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      23051544..23053893
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203233.1 → NP_001190162.1  ADP-ribosylation factor A1E [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190162.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VN00, A0A384L6Z1, A0A5S9Y456, A0A654G139, Q9M1P5
      Conserved Domains (1) summary
      PLN00223
      Location:1 → 181
      PLN00223; ADP-ribosylation factor; Provisional
    2. NM_001203232.1 → NP_001190161.1  ADP-ribosylation factor A1E [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190161.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VN00, A0A384L6Z1, A0A5S9Y456, A0A654G139, Q9M1P5
      Conserved Domains (1) summary
      PLN00223
      Location:1 → 181
      PLN00223; ADP-ribosylation factor; Provisional
    3. NM_116094.4 → NP_191788.1  ADP-ribosylation factor A1E [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191788.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VN00, A0A384L6Z1, A0A5S9Y456, A0A654G139, Q9M1P5
      Conserved Domains (1) summary
      PLN00223
      Location:1 → 181
      PLN00223; ADP-ribosylation factor; Provisional
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