U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Y57E12AL.1 Serine incorporator 1 [ Caenorhabditis elegans ]

    Gene ID: 179093, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Y57E12AL.1
    Official Full Name
    Serine incorporator 1
    Primary source
    WormBase:WBGene00021956
    Locus tag
    CELE_Y57E12AL.1
    See related
    AllianceGenome:WB:WBGene00021956
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in membrane. Orthologous to several human genes including SERINC1 (serine incorporator 1) and SERINC3 (serine incorporator 3). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Y57E12AL.1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (7060811..7062723)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Mediator of RNA polymerase II transcription subunit 6 Neighboring gene Uncharacterized protein Neighboring gene Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit TMEM258 Neighboring gene BPTI/Kunitz inhibitor domain-containing protein Neighboring gene tRNA-Glu Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Serine incorporator 1
    NP_001370669.1
    • Confirmed by transcript evidence
    NP_741561.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      7060811..7062723
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171479.9 → NP_741561.1  Serine incorporator 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741561.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95XV3
      Conserved Domains (1) summary
      pfam03348
      Location:18 → 458
      Serinc; Serine incorporator (Serinc)

    2. NM_001383330.2 → NP_001370669.1  Serine incorporator 1 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZT9
      Conserved Domains (1) summary
      pfam03348
      Location:18 → 452
      Serinc; Serine incorporator (Serinc)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools
    Miscellaneous