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    BTB/POZ domain protein TNFAIP protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829485, updated on 18-Sep-2024

    Summary

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    Official Full Name
    BTB/POZ domain protein TNFAIP protein
    Primary source
    TAIR:AT4G33480
    Locus tag
    AT4G33480
    See related
    Araport:AT4G33480
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17M5.240; F17M5_240
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    10
    Sequence:
    Chromosome: 4; NC_003075.7 (16105570..16108646, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene SCR-like 22 Neighboring gene uncharacterized protein Neighboring gene histone deacetylase 14 Neighboring gene Eukaryotic aspartyl protease family protein Neighboring gene Ubiquitin carboxyl-terminal hydrolase family protein Neighboring gene Protein phosphatase 2C family protein Neighboring gene 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_119502.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    BTB/POZ domain protein TNFAIP protein
    NP_195074.2
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3727 (InterPro:IPR022203); Has 348 Blast hits to 348 proteins in 78 species: Archae - 0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16105570..16108646 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119502.4 → NP_195074.2  BTB/POZ domain protein TNFAIP protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195074.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V760, A0A654FV56, A2RVW1
      Conserved Domains (1) summary
      pfam12527
      Location:219 → 313
      DUF3727; Protein of unknown function (DUF3727)
    Nucleotide Protein
    Heading Accession and Version

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