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Conserved domains on  [gi|30689705|ref|NP_195074|]
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BTB/POZ domain protein TNFAIP protein [Arabidopsis thaliana]

Protein Classification

DUF3727 domain-containing protein( domain architecture ID 10576048)

DUF3727 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF3727 pfam12527
Protein of unknown function (DUF3727); This domain family is found in bacteria and eukaryotes, ...
219-313 1.42e-29

Protein of unknown function (DUF3727); This domain family is found in bacteria and eukaryotes, and is approximately 100 amino acids in length.


:

Pssm-ID: 432610  Cd Length: 97  Bit Score: 108.82  E-value: 1.42e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30689705   219 HMHLVHSGFCYTARGGF-CYTEDNVFDFRTDDgqDVEGLPTEGVEITC-FHLDGSHYMVYTPSDPLLFVAAKDQNGLLQI 296
Cdd:pfam12527   1 NLTLKRTAFTLTVEGELpPDDEEEILTLEEEE--DDDGLEEEEYQLLAsFYHEEQEYGIYTPLDPLLFVARLDENGEPEL 78
                          90
                  ....*....|....*....
gi 30689705   297 ADDELLD--DPAVISAIDE 313
Cdd:pfam12527  79 LSPEEFDeiQPILEELLFE 97
 
Name Accession Description Interval E-value
DUF3727 pfam12527
Protein of unknown function (DUF3727); This domain family is found in bacteria and eukaryotes, ...
219-313 1.42e-29

Protein of unknown function (DUF3727); This domain family is found in bacteria and eukaryotes, and is approximately 100 amino acids in length.


Pssm-ID: 432610  Cd Length: 97  Bit Score: 108.82  E-value: 1.42e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30689705   219 HMHLVHSGFCYTARGGF-CYTEDNVFDFRTDDgqDVEGLPTEGVEITC-FHLDGSHYMVYTPSDPLLFVAAKDQNGLLQI 296
Cdd:pfam12527   1 NLTLKRTAFTLTVEGELpPDDEEEILTLEEEE--DDDGLEEEEYQLLAsFYHEEQEYGIYTPLDPLLFVARLDENGEPEL 78
                          90
                  ....*....|....*....
gi 30689705   297 ADDELLD--DPAVISAIDE 313
Cdd:pfam12527  79 LSPEEFDeiQPILEELLFE 97
 
Name Accession Description Interval E-value
DUF3727 pfam12527
Protein of unknown function (DUF3727); This domain family is found in bacteria and eukaryotes, ...
219-313 1.42e-29

Protein of unknown function (DUF3727); This domain family is found in bacteria and eukaryotes, and is approximately 100 amino acids in length.


Pssm-ID: 432610  Cd Length: 97  Bit Score: 108.82  E-value: 1.42e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 30689705   219 HMHLVHSGFCYTARGGF-CYTEDNVFDFRTDDgqDVEGLPTEGVEITC-FHLDGSHYMVYTPSDPLLFVAAKDQNGLLQI 296
Cdd:pfam12527   1 NLTLKRTAFTLTVEGELpPDDEEEILTLEEEE--DDDGLEEEEYQLLAsFYHEEQEYGIYTPLDPLLFVARLDENGEPEL 78
                          90
                  ....*....|....*....
gi 30689705   297 ADDELLD--DPAVISAIDE 313
Cdd:pfam12527  79 LSPEEFDeiQPILEELLFE 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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