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    GATL6 galacturonosyltransferase 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827438, updated on 18-Sep-2024

    Summary

    Official Symbol
    GATL6
    Official Full Name
    galacturonosyltransferase 6
    Primary source
    TAIR:AT4G02130
    Locus tag
    AT4G02130
    See related
    Araport:AT4G02130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    galacturonosyltransferase 6; galacturonosyltransferase-like 6; LGT10; T10M13.14; T10M13_14
    Summary
    Encodes a protein with putative galacturonosyltransferase activity.
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    Genomic context

    See GATL6 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (944324..947249, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Heat shock protein DnaJ with tetratricopeptide repeat-containing protein Neighboring gene transcription coactivator Neighboring gene CTP synthase family protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ARM repeat superfamily protein

    Pathways from PubChem

    General gene information

    NM_001036496.1
    NM_116445.2
    NM_178954.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables polygalacturonate 4-alpha-galacturonosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in pectin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    galacturonosyltransferase 6
    NP_001031573.1
    • galacturonosyltransferase 6 (GATL6); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_192122.1
    • galacturonosyltransferase 6 (GATL6); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 2064 Blast hits to 2054 proteins in 482 species: Archae - 0; Bacteria - 957; Metazoa - 296; Fungi - 4; Plants - 738; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
    NP_849285.1
    • galacturonosyltransferase 6 (GATL6); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 5 (TAIR:AT1G02720.2); Has 2064 Blast hits to 2054 proteins in 482 species: Archae - 0; Bacteria - 957; Metazoa - 296; Fungi - 4; Plants - 738; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      944324..947249 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116445.2NP_192122.1  galacturonosyltransferase 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192122.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O04253, Q8LD72, Q8RX31
      UniProtKB/TrEMBL
      A0A5S9XP62, A0A654FL79, W8Q309
      Conserved Domains (1) summary
      pfam01501
      Location:67321
      Glyco_transf_8; Glycosyl transferase family 8
    2. NM_001036496.1NP_001031573.1  galacturonosyltransferase 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031573.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O04253, Q8LD72, Q8RX31
      UniProtKB/TrEMBL
      A0A5S9XP62, A0A654FL79, W8Q309
      Conserved Domains (1) summary
      pfam01501
      Location:67321
      Glyco_transf_8; Glycosyl transferase family 8
    3. NM_178954.2NP_849285.1  galacturonosyltransferase 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849285.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O04253, Q8LD72, Q8RX31
      UniProtKB/TrEMBL
      A0A5S9XP62, A0A654FL79, W8Q309
      Conserved Domains (1) summary
      pfam01501
      Location:67321
      Glyco_transf_8; Glycosyl transferase family 8