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    VAMP725 vesicle-associated membrane protein 725 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817827, updated on 18-Sep-2024

    Summary

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    Official Symbol
    VAMP725
    Official Full Name
    vesicle-associated membrane protein 725
    Primary source
    TAIR:AT2G32670
    Locus tag
    AT2G32670
    See related
    Araport:AT2G32670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATVAMP725; F24L7.19; F24L7_19; vesicle-associated membrane protein 725
    Summary
    member of Synaptobrevin -like protein family
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    Genomic context

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    See VAMP725 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (13857877..13859774)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene RmlC-like cupins superfamily protein Neighboring gene B3 domain protein, putative (DUF313) Neighboring gene receptor like protein 22 Neighboring gene ncRNA Neighboring gene receptor like protein 23 Neighboring gene glycine-rich protein 23 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. VAMP726 and VAMP725 regulate vesicle secretion and pollen tube growth in Arabidopsis. Liu X, et al. Plant Cell Rep, 2023 Dec. PMID 37805949
    2. The longin domain regulates subcellular targeting of VAMP7 in Arabidopsis thaliana. Uemura T, et al. FEBS Lett, 2005 May 23. PMID 15876431
    3. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. VAMP726 and VAMP725 regulate vesicle secretion and pollen tube growth in Arabidopsis.
      Title: VAMP726 and VAMP725 regulate vesicle secretion and pollen tube growth in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_128826.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables SNARE binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vesicle-associated membrane protein 725
    NP_180826.2
    • vesicle-associated membrane protein 725 (VAMP725); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 2451 Blast hits to 2449 proteins in 264 species: Archae - 0; Bacteria - 0; Metazoa - 984; Fungi - 445; Plants - 609; Viruses - 0; Other Eukaryotes - 413 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13857877..13859774
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128826.4 → NP_180826.2  vesicle-associated membrane protein 725 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180826.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O48850, Q8GXC1
      Conserved Domains (3) summary
      cd15843
      Location:195 → 253
      R-SNARE; SNARE motif, subgroup R-SNARE
      pfam00957
      Location:192 → 260
      Synaptobrevin; Synaptobrevin
      pfam13774
      Location:97 → 168
      Longin; Regulated-SNARE-like domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O48850.2

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