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vesicle-associated membrane protein 725 [Arabidopsis thaliana]

NCBI Reference Sequence: NP_180826.2

Identical Proteins FASTA Graphics 

LOCUS       NP_180826                285 aa            linear   PLN 20-OCT-2022
DEFINITION  vesicle-associated membrane protein 725 [Arabidopsis thaliana].
ACCESSION   NP_180826
VERSION     NP_180826.2
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_128826.4
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 285)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (residues 1 to 285)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 285)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 285)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AEC08714.
            
            On May 13, 2003 this sequence version replaced NP_180826.1.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     Protein         1..285
                     /product="vesicle-associated membrane protein 725"
                     /calculated_mol_wt=32560
     Region          72..186
                     /region_name="Longin"
                     /note="longin domain; cd14824"
                     /db_xref="CDD:341428"
     Site            order(72,93,96,115,118,120)
                     /site_type="lipid-binding"
                     /note="lipid binding site [chemical binding]"
                     /db_xref="CDD:341428"
     Site            order(82,85,87,94,98,177,181,184)
                     /site_type="other"
                     /note="Sec22 interface [polypeptide binding]"
                     /db_xref="CDD:341428"
     Site            order(114,117,137,141)
                     /site_type="other"
                     /note="VARP interface [polypeptide binding]"
                     /db_xref="CDD:341428"
     Region          192..>260
                     /region_name="Synaptobrevin"
                     /note="pfam00957"
                     /db_xref="CDD:395764"
     CDS             1..285
                     /gene="VAMP725"
                     /locus_tag="AT2G32670"
                     /gene_synonym="ATVAMP725; F24L7.19; F24L7_19;
                     vesicle-associated membrane protein 725"
                     /coded_by="NM_128826.4:65..922"
                     /inference="Similar to RNA sequence,
                     EST:INSD:AU239178.1,INSD:AU230456.1,INSD:BP822486.1,
                     INSD:BE527467.1,INSD:BP644355.1,INSD:AV519241.1,
                     INSD:BP800664.1,INSD:BP800723.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BT006042.1,INSD:BX819808.1,INSD:AK118318.1"
                     /note="vesicle-associated membrane protein 725 (VAMP725);
                     FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
                     transport, vesicle-mediated transport; LOCATED IN:
                     endosome, plasma membrane, membrane; EXPRESSED IN: 17
                     plant structures; EXPRESSED DURING: 8 growth stages;
                     CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908),
                     Longin-like (InterPro:IPR011012), Synaptobrevin
                     (InterPro:IPR001388); BEST Arabidopsis thaliana protein
                     match is: vesicle-associated membrane protein 726
                     (TAIR:AT1G04760.1); Has 2451 Blast hits to 2449 proteins
                     in 264 species: Archae - 0; Bacteria - 0; Metazoa - 984;
                     Fungi - 445; Plants - 609; Viruses - 0; Other Eukaryotes -
                     413 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G32670"
                     /db_xref="GeneID:817827"
                     /db_xref="TAIR:AT2G32670"
ORIGIN      
        1 mdrsvvpisl apfqfllvfw ifltsvhtnp nkqqktvvsl slwwnsknri rgcvwfffll
       61 rvtrtmgqqn liysfvargt vilveytefk gnftavaaqc lqklpssnnk ftyncdghtf
      121 nylvengfty cvvavesvgr qipmaflerv kedfnkrygg gkattaqans lnrefgsklk
      181 ehmqycvdhp deisklakvk aqvtevkgvm meniekvldr gekiellvdk tenlrsqaqd
      241 frtqgtkirr kmwfenmkik livlgiiitl iliiilsvcg gfkct
//
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Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the VAMP725 gene (NM_128826.4).

More about the VAMP725 gene

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