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    MYB120 myb domain protein 120 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835593, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MYB120
    Official Full Name
    myb domain protein 120
    Primary source
    TAIR:AT5G55020
    Locus tag
    AT5G55020
    See related
    Araport:AT5G55020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATMYB120; K13P22.2; K13P22_2; myb domain protein 120
    Summary
    Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB120).
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    Genomic context

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    See MYB120 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (22324599..22326418, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene potassium channel tetramerization domain-containing protein / pentapeptide repeat-containing protein Neighboring gene uncharacterized protein Neighboring gene DNA-binding bromodomain-containing protein Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene tRNA-Phe

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. MYB97, MYB101 and MYB120 function as male factors that control pollen tube-synergid interaction in Arabidopsis thaliana fertilization. Liang Y, et al. PLoS Genet, 2013 Nov. PMID 24278028, Free PMC Article
    2. Three MYB transcription factors control pollen tube differentiation required for sperm release. Leydon AR, et al. Curr Biol, 2013 Jul 8. PMID 23791732, Free PMC Article
    3. Penetration of the stigma and style elicits a novel transcriptome in pollen tubes, pointing to genes critical for growth in a pistil. Qin Y, et al. PLoS Genet, 2009 Aug. PMID 19714218, Free PMC Article
    4. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
    5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. All these results indicate that MYB97, MYB101 and MYB120 participate in pollen tube reception, possibly by controlling the expression of downstream genes.
      Title: MYB97, MYB101 and MYB120 function as male factors that control pollen tube-synergid interaction in Arabidopsis thaliana fertilization.
    Submit: New GeneRIF Correction

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in pollen sperm cell differentiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen tube growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in positive regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in regulation of gene expression IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of pollen tube growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in pollen tube IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myb domain protein 120
    NP_568819.1
    • myb domain protein 120 (MYB120); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 97 (TAIR:AT4G26930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22324599..22326418 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124884.2 → NP_568819.1  myb domain protein 120 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568819.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      N0ACH1, Q94FL7, Q9FIA4
      UniProtKB/TrEMBL
      A0A5S9YF97
      Conserved Domains (1) summary
      cl28544
      Location:26 → 134
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q94FL7.1

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