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    ASTN2 astrotactin 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702370, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ASTN2provided by VGNC
    Official Full Name
    astrotactin 2provided by VGNC
    Primary source
    VGNC:VGNC:70087
    See related
    Ensembl:ENSMMUG00000013105
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ASTN2 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (25402756..26387487)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (21922540..22733115)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene toll like receptor 4 Neighboring gene uncharacterized LOC114672628 Neighboring gene tripartite motif containing 32 Neighboring gene protein PAPPAS Neighboring gene pappalysin 1 Neighboring gene uncharacterized LOC114672629

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in neuron cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    astrotactin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      25402756..26387487
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015116965.2 → XP_014972451.2  astrotactin-2 isoform X1

      UniProtKB/TrEMBL
      F6UFH1, F7HU42
      Related
      ENSMMUP00000039777.2, ENSMMUT00000046749.3
      Conserved Domains (2) summary
      smart00457
      Location:851 → 1034
      MACPF; membrane-attack complex / perforin
      pfam14670
      Location:702 → 749
      FXa_inhibition; Coagulation Factor Xa inhibitory site

    2. XM_015116966.2 → XP_014972452.2  astrotactin-2 isoform X2

      UniProtKB/TrEMBL
      F6UFH1
      Conserved Domains (2) summary
      smart00457
      Location:850 → 1033
      MACPF; membrane-attack complex / perforin
      pfam14670
      Location:701 → 748
      FXa_inhibition; Coagulation Factor Xa inhibitory site

    3. XM_015116967.2 → XP_014972453.2  astrotactin-2 isoform X3

      UniProtKB/TrEMBL
      F6UFH1
      Conserved Domains (2) summary
      smart00457
      Location:847 → 1030
      MACPF; membrane-attack complex / perforin
      pfam14670
      Location:698 → 745
      FXa_inhibition; Coagulation Factor Xa inhibitory site

    4. XM_015116968.2 → XP_014972454.2  astrotactin-2 isoform X4

      UniProtKB/TrEMBL
      F6UFH1, F6ZUE2
      Related
      ENSMMUP00000017210.4, ENSMMUT00000018380.4
      Conserved Domains (2) summary
      smart00457
      Location:800 → 983
      MACPF; membrane-attack complex / perforin
      pfam14670
      Location:651 → 698
      FXa_inhibition; Coagulation Factor Xa inhibitory site

    5. XM_028835433.1 → XP_028691266.1  astrotactin-2 isoform X5

      UniProtKB/TrEMBL
      G7NG30
      Conserved Domains (2) summary
      smart00457
      Location:704 → 887
      MACPF; membrane-attack complex / perforin
      pfam14670
      Location:555 → 602
      FXa_inhibition; Coagulation Factor Xa inhibitory site

    6. XM_028835434.1 → XP_028691267.1  astrotactin-2 isoform X6

      Conserved Domains (2) summary
      cd00063
      Location:118 → 240
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cl02616
      Location:1 → 87
      MACPF; MAC/Perforin domain
    Nucleotide Protein
    Heading Accession and Version

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