U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG1354 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31914, updated on 27-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG1354provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030151
    Locus tag
    Dmel_CG1354
    See related
    AllianceGenome:FB:FBgn0030151
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG1354
    Summary
    Predicted to enable ATP hydrolysis activity. Predicted to be active in cytoplasm. Is expressed in several structures, including adult head; central brain primordium; embryonic/larval midgut primordium; ganglia; and trunk visceral muscle primordium. Orthologous to human OLA1 (Obg like ATPase 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG1354 in Genome Data Viewer
    Location:
    9A1-9A1; 1-30 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (9778742..9782094)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (9672775..9676127)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43498 Neighboring gene Sp1 Neighboring gene Carbonic anhydrase-related protein B Neighboring gene Ser7

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Non-redundant selector and growth-promoting functions of two sister genes, buttonhead and Sp1, in Drosophila leg development. Estella C, et al. PLoS Genet, 2010 Jun 24. PMID 20585625, Free PMC Article
    2. Non-random genomic integration - an intrinsic property of retrogenes in Drosophila? Metta M, et al. BMC Evol Biol, 2010 Apr 28. PMID 20426838, Free PMC Article
    3. Faint gray bands in Drosophila melanogaster polytene chromosomes are formed by coding sequences of housekeeping genes. Demakova OV, et al. Chromosoma, 2020 Mar. PMID 31820086
    4. Evolutionary Dynamics of Abundant Stop Codon Readthrough. Jungreis I, et al. Mol Biol Evol, 2016 Dec. PMID 27604222, Free PMC Article
    5. Active promoters and insulators are marked by the centrosomal protein 190. Bartkuhn M, et al. EMBO J, 2009 Apr 8. PMID 19229299, Free PMC Article

    See all (38) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG1354-PA
    CG1354-PB
    CG1354-PC
    CG1354-PD
    CG1354-PE
    CG1354-PF

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      9778742..9782094
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_167202.4 → NP_727363.1  uncharacterized protein Dmel_CG1354, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727363.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8IRM4, Q8SWU7, Q9W317
      UniProtKB/TrEMBL
      C9QP30, E6PBV6
      Related
      FBpp0088410
      Conserved Domains (3) summary
      cd01900
      Location:24 → 301
      YchF; YchF GTPase
      PTZ00258
      Location:1 → 387
      PTZ00258; GTP-binding protein; Provisional
      pfam06071
      Location:303 → 386
      YchF-GTPase_C; Protein of unknown function (DUF933)

    2. NM_167201.4 → NP_727362.1  uncharacterized protein Dmel_CG1354, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727362.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8IRM4, Q8SWU7, Q9W317
      UniProtKB/TrEMBL
      C9QP30, E6PBV6
      Related
      FBpp0088409
      Conserved Domains (3) summary
      cd01900
      Location:24 → 301
      YchF; YchF GTPase
      PTZ00258
      Location:1 → 387
      PTZ00258; GTP-binding protein; Provisional
      pfam06071
      Location:303 → 386
      YchF-GTPase_C; Protein of unknown function (DUF933)

    3. NM_001369969.1 → NP_001356937.1  uncharacterized protein Dmel_CG1354, isoform F [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4D6K4F6
      Conserved Domains (1) summary
      PTZ00258
      Location:1 → 387
      PTZ00258; GTP-binding protein; Provisional

    4. NM_132352.4 → NP_572580.1  uncharacterized protein Dmel_CG1354, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572580.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8IRM4, Q8SWU7, Q9W317
      UniProtKB/TrEMBL
      C9QP30, E6PBV6
      Related
      FBpp0088408
      Conserved Domains (3) summary
      cd01900
      Location:24 → 301
      YchF; YchF GTPase
      PTZ00258
      Location:1 → 387
      PTZ00258; GTP-binding protein; Provisional
      pfam06071
      Location:303 → 386
      YchF-GTPase_C; Protein of unknown function (DUF933)

    5. NM_001272460.1 → NP_001259389.1  uncharacterized protein Dmel_CG1354, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259389.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8IRM4, Q8SWU7, Q9W317
      UniProtKB/TrEMBL
      C9QP30, E6PBV6
      Conserved Domains (3) summary
      cd01900
      Location:24 → 301
      YchF; YchF GTPase
      PTZ00258
      Location:1 → 387
      PTZ00258; GTP-binding protein; Provisional
      pfam06071
      Location:303 → 386
      YchF-GTPase_C; Protein of unknown function (DUF933)

    6. NM_167203.2 → NP_727364.1  uncharacterized protein Dmel_CG1354, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727364.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C9QP30
      Related
      FBpp0088411
      Conserved Domains (2) summary
      cd01900
      Location:13 → 252
      YchF; YchF GTPase
      pfam06071
      Location:254 → 337
      YchF-GTPase_C; Protein of unknown function (DUF933)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A4D6K4F6 A0A4D6K4F6
    E6PBV6 E6PBV6
    Q8SWU7.1 Q8SWU7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Chemical Information
    Molecular Biology Databases
    Research Materials
    Tools
    Miscellaneous