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    hypothetical protein (DUF1163) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825241, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF1163)
    Primary source
    TAIR:AT3G60700
    Locus tag
    AT3G60700
    See related
    Araport:AT3G60700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (22438223..22439294)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene DUF641 family protein (DUF641) Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene F-box family protein Neighboring gene plasmodesmata-located protein 8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_115934.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF1163)
    NP_191629.1
    • Protein of unknown function (DUF1163); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1163 (InterPro:IPR009544); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1163) (TAIR:AT1G70040.1); Has 41 Blast hits to 41 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      22438223..22439294
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115934.3 → NP_191629.1  hypothetical protein (DUF1163) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191629.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VJE7, A0A5S9XMV6, Q9LZZ3
      Conserved Domains (1) summary
      pfam06651
      Location:149 → 216
      DUF1163; Protein of unknown function (DUF1163)
    Nucleotide Protein
    Heading Accession and Version

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