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Conserved domains on  [gi|15232402|ref|NP_191629|]
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hypothetical protein (DUF1163) [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1163 pfam06651
Protein of unknown function (DUF1163); This family represents the C-terminus of hypothetical ...
 149-216 1.36e-31

Protein of unknown function (DUF1163); This family represents the C-terminus of hypothetical Arabidopsis thaliana proteins of unknown function.


:

Pssm-ID: 284144  Cd Length: 67  Bit Score: 109.83  E-value: 1.36e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15232402   149 NGAIGKNIVNDIKERSEVRLGLRLFLPDCRENKAGTMKFACDEVKMKFESSyeQKITSTVVG-YPNCLY 216
Cdd:pfam06651   1 SGLIGKDIMEDIKEKKEVRFGSRLFLTDCREGTTGVMSYACDEVTLRFEPG--SEMKATVFGnHPTCIN 67
 
Name Accession Description Interval E-value
DUF1163 pfam06651
Protein of unknown function (DUF1163); This family represents the C-terminus of hypothetical ...
 149-216 1.36e-31

Protein of unknown function (DUF1163); This family represents the C-terminus of hypothetical Arabidopsis thaliana proteins of unknown function.


Pssm-ID: 284144  Cd Length: 67  Bit Score: 109.83  E-value: 1.36e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15232402   149 NGAIGKNIVNDIKERSEVRLGLRLFLPDCRENKAGTMKFACDEVKMKFESSyeQKITSTVVG-YPNCLY 216
Cdd:pfam06651   1 SGLIGKDIMEDIKEKKEVRFGSRLFLTDCREGTTGVMSYACDEVTLRFEPG--SEMKATVFGnHPTCIN 67
 
Name Accession Description Interval E-value
DUF1163 pfam06651
Protein of unknown function (DUF1163); This family represents the C-terminus of hypothetical ...
 149-216 1.36e-31

Protein of unknown function (DUF1163); This family represents the C-terminus of hypothetical Arabidopsis thaliana proteins of unknown function.


Pssm-ID: 284144  Cd Length: 67  Bit Score: 109.83  E-value: 1.36e-31
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 15232402   149 NGAIGKNIVNDIKERSEVRLGLRLFLPDCRENKAGTMKFACDEVKMKFESSyeQKITSTVVG-YPNCLY 216
Cdd:pfam06651   1 SGLIGKDIMEDIKEKKEVRFGSRLFLTDCREGTTGVMSYACDEVTLRFEPG--SEMKATVFGnHPTCIN 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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