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    Ppp1r36 protein phosphatase 1, regulatory subunit 36 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 299153, updated on 27-Dec-2024

    Summary

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    Official Symbol
    Ppp1r36provided by RGD
    Official Full Name
    protein phosphatase 1, regulatory subunit 36provided by RGD
    Primary source
    RGD:1309051
    See related
    EnsemblRapid:ENSRNOG00000038480 AllianceGenome:RGD:1309051
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1309051
    Summary
    Predicted to enable phosphatase binding activity and protein phosphatase inhibitor activity. Orthologous to human PPP1R36 (protein phosphatase 1 regulatory subunit 36). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 201.8), Kidney (RPKM 100.0) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Ppp1r36 in Genome Data Viewer
    Location:
    6q24
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (100874397..100894764)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (95138526..95159102)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (99443753..99464143)

    Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 1 Neighboring gene uncharacterized LOC120103556 Neighboring gene heat shock protein family A (Hsp70) member 2 Neighboring gene uncharacterized LOC102556012 Neighboring gene ribosomal protein S17 like 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Docking motif-guided mapping of the interactome of protein phosphatase-1. Hendrickx A, et al. Chem Biol, 2009 Apr 24. PMID 19389623
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables phosphatase binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein phosphatase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    protein phosphatase 1 regulatory subunit 36
    Names
    uncharacterized protein C14orf50 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001013944.1 → NP_001013966.1  protein phosphatase 1 regulatory subunit 36

      See identical proteins and their annotated locations for NP_001013966.1

      Status: PROVISIONAL

      Source sequence(s)
      BC079166
      UniProtKB/Swiss-Prot
      Q68FW6
      UniProtKB/TrEMBL
      A0A8I6GEJ5
      Related
      ENSRNOP00000086046.1, ENSRNOT00000109825.2
      Conserved Domains (1) summary
      pfam14895
      Location:67 → 400
      PPPI_inhib; Protein phosphatase 1 inhibitor

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086024.1 Reference GRCr8

      Range
      100874397..100894764
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017594094.3 → XP_017449583.1  protein phosphatase 1 regulatory subunit 36 isoform X2

      UniProtKB/TrEMBL
      A0A8I6GIY3, A6HCA8
      Related
      ENSRNOP00000091380.1, ENSRNOT00000094023.2

    2. XM_039112012.2 → XP_038967940.1  protein phosphatase 1 regulatory subunit 36 isoform X1

      Related
      ENSRNOP00000106786.1, ENSRNOT00000163218.1
      Conserved Domains (1) summary
      pfam14895
      Location:98 → 431
      PPPI_inhib; Protein phosphatase 1 inhibitor

    3. XM_039112013.2 → XP_038967941.1  protein phosphatase 1 regulatory subunit 36 isoform X4

      UniProtKB/TrEMBL
      A6HCA8
      Conserved Domains (1) summary
      pfam14895
      Location:7 → 335
      PPPI_inhib; Protein phosphatase 1 inhibitor

    4. XM_006240231.3 → XP_006240293.1  protein phosphatase 1 regulatory subunit 36 isoform X3

      UniProtKB/TrEMBL
      A0A8I6GEJ5
      Related
      ENSRNOP00000055437.4, ENSRNOT00000058642.6
      Conserved Domains (1) summary
      pfam14895
      Location:31 → 364
      PPPI_inhib; Protein phosphatase 1 inhibitor
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q68FW6.1 GenPept UniProtKB/Swiss-Prot:Q68FW6

    Gene LinkOut

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