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    Or13a Odorant receptor 13a [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32562, updated on 17-Dec-2024

    Summary

    Official Symbol
    Or13aprovided by FlyBase
    Official Full Name
    Odorant receptor 13aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030715
    Locus tag
    Dmel_CG12697
    See related
    AllianceGenome:FB:FBgn0030715
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    13a; 13F.1; CG12697; Dmel\CG12697; dOr13a; DOR38; or13a; OR13a
    Summary
    Predicted to enable ionotropic olfactory receptor activity and odorant binding activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to be located in dendrite membrane. Predicted to be part of cation channel complex. Predicted to be active in plasma membrane. Is expressed in adult olfactory receptor neuron Or13a; antennal lobe glomerulus DC2; larval antennal lobe glomerulus 13a; and larval olfactory receptor neuron Or13a. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Or13a in Genome Data Viewer
    Location:
    14A4-14A4; 1-52 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (15974425..15976706)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (15868458..15870739)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene mind-meld Neighboring gene mir-927 stem loop Neighboring gene long non-coding RNA:CR45527 Neighboring gene uncharacterized protein Neighboring gene centrosomal protein 164

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ionotropic olfactory receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in detection of chemical stimulus involved in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in detection of chemical stimulus involved in sensory perception of smell ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of cation channel complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in dendrite membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    odorant receptor 13a
    Names
    CG12697-PA
    Or13a-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      15974425..15976706
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078635.3NP_523359.2  odorant receptor 13a [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523359.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VXL0
      Related
      FBpp0073938, FBtr0074133
      Conserved Domains (1) summary
      pfam02949
      Location:78399
      7tm_6; 7tm Odorant receptor