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    nocte no circadian temperature entrainment [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31976, updated on 9-Dec-2024

    Summary

    Official Symbol
    nocteprovided by FlyBase
    Official Full Name
    no circadian temperature entrainmentprovided by FlyBase
    Primary source
    FLYBASE:FBgn0261710
    Locus tag
    Dmel_CG17255
    See related
    AllianceGenome:FB:FBgn0261710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG17255; Dmel\CG17255
    Summary
    Enables mRNA 5'-UTR binding activity. Involved in entrainment of circadian clock; temperature compensation of the circadian clock; and translation reinitiation. Is active in cytosol. Is expressed in several structures, including adult chordotonal organ; chordotonal neurons; larval internal muscle motor neurons; longitudinal vein; and organism subdivision. Orthologous to human PRRC2C (proline rich coiled-coil 2C). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See nocte in Genome Data Viewer
    Location:
    9C5-9D1; 1-32 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (10461865..10474675, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (10355898..10368708, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Neb-cGP Neighboring gene Odorant receptor 9a Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Protein phosphatase 4 regulatory subunit 2-related protein

    Genomic regions, transcripts, and products

    Bibliography

    Interactions

    General gene information

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in cytosol PubMed 

    General protein information

    Preferred Names
    no circadian temperature entrainment
    Names
    CG17255-PA
    CG17255-PB
    CG17255-PC
    CG17255-PD
    nocte-PA
    nocte-PB
    nocte-PC
    nocte-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      10461865..10474675 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001272480.1 → NP_001259409.1  no circadian temperature entrainment, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259409.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PE74
      Conserved Domains (1) summary
      pfam07001
      Location:1 → 155
      BAT2_N; BAT2 N-terminus
    2. NM_167231.5 → NP_727425.3  no circadian temperature entrainment, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727425.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W2U7
      Conserved Domains (1) summary
      pfam07001
      Location:1 → 155
      BAT2_N; BAT2 N-terminus
    3. NM_001258685.2 → NP_001245614.1  no circadian temperature entrainment, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001245614.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W2U7
      Conserved Domains (1) summary
      pfam07001
      Location:1 → 155
      BAT2_N; BAT2 N-terminus
    4. NM_132403.5 → NP_572631.3  no circadian temperature entrainment, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572631.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W2U7
      Conserved Domains (1) summary
      pfam07001
      Location:1 → 155
      BAT2_N; BAT2 N-terminus
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