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    SRO4 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823926, updated on 18-Sep-2024

    Summary

    Official Symbol
    SRO4
    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT3G47720
    Locus tag
    AT3G47720
    See related
    Araport:AT3G47720
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    similar to RCD one 4; T23J7_50
    Summary
    Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.
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    Genomic context

    See SRO4 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (17592558..17594132)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RINT-1 / TIP-1 family Neighboring gene BANQUO 3 Neighboring gene ncRNA Neighboring gene ATP-binding cassette A2 Neighboring gene ncRNA Neighboring gene ABC2 homolog 2

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_114640.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables NAD+-protein poly-ADP-ribosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein
    NP_190356.2
    • similar to RCD one 4 (SRO4); FUNCTIONS IN: NAD+ ADP-ribosyltransferase activity; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Poly(ADP-ribose) polymerase, catalytic domain (InterPro:IPR012317), RST domain of plant C-terminal (InterPro:IPR022003); BEST Arabidopsis thaliana protein match is: similar to RCD one 5 (TAIR:AT5G62520.1); Has 159 Blast hits to 149 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      17592558..17594132
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114640.4NP_190356.2  uncharacterized protein AT3G47720 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190356.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JCP0, Q9STU1
      UniProtKB/TrEMBL
      A0A178VLK6
      Conserved Domains (1) summary
      pfam12174
      Location:244308
      RST; RCD1-SRO-TAF4 (RST) plant domain