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    ARL1 ARG1-like 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839024, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ARL1
    Official Full Name
    ARG1-like 1
    Primary source
    TAIR:AT1G24120
    Locus tag
    AT1G24120
    See related
    Araport:AT1G24120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARG1-like 1; F3I6.4; F3I6_4
    Summary
    encodes a DnaJ-like protein similar to ARG1 and ARL2 that are both involved in root and hypocotyl gravitropism response. However, null mutation in this gene does not result in defects in gravitropism. Gene is expressed in all tissues examined.
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    Genomic context

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    See ARL1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (8529064..8532262, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene UDP-glucosyl transferase 74B1 Neighboring gene Peroxidase superfamily protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene Matrixin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SCARECROW has a SHORT-ROOT-independent role in modulating the sugar response. Cui H, et al. Plant Physiol, 2012 Apr. PMID 22312006, Free PMC Article
    2. Fluorescence lifetime imaging of interactions between Golgi tethering factors and small GTPases in plants. Osterrieder A, et al. Traffic, 2009 Aug. PMID 19490533
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_102258.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to abscisic acid IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ARG1-like 1
    NP_173822.2
    • ARG1-like 1 (ARL1); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 2 (TAIR:AT1G59980.1); Has 24851 Blast hits to 24751 proteins in 3316 species: Archae - 174; Bacteria - 9800; Metazoa - 4410; Fungi - 2460; Plants - 2464; Viruses - 13; Other Eukaryotes - 5530 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      8529064..8532262 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102258.6 → NP_173822.2  ARG1-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173822.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O48678, Q8VXV4
      UniProtKB/TrEMBL
      A0A178WD97, A0A384KYZ6, A0A5S9VRI5, Q1EBT7
      Conserved Domains (2) summary
      PRK14284
      Location:20 → 174
      PRK14284; chaperone protein DnaJ; Provisional
      pfam00226
      Location:20 → 82
      DnaJ; DnaJ domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8VXV4.1

    Gene LinkOut

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