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    MLP-300B myrosinase-binding protein-like protein-300B [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820892, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MLP-300B
    Official Full Name
    myrosinase-binding protein-like protein-300B
    Primary source
    TAIR:AT3G16440
    Locus tag
    AT3G16440
    See related
    Araport:AT3G16440
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATMLP-300B; maternal effect embryo arrest 36; MEE36; myrosinase-binding protein-like protein-300B; T2O4.19
    Summary
    myrosinase-binding protein-like protein (AtMLP-300B) mRNA
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    Genomic context

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    See MLP-300B in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (5585872..5587798)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene jacalin-related lectin 31 Neighboring gene uncharacterized protein Neighboring gene Mannose-binding lectin superfamily protein Neighboring gene Mannose-binding lectin superfamily protein Neighboring gene Mannose-binding lectin superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and molecular identification of genes required for female gametophyte development and function in Arabidopsis. Pagnussat GC, et al. Development, 2005 Feb. PMID 15634699
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    NM_112515.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myrosinase-binding protein-like protein-300B
    NP_188265.1
    • myrosinase-binding protein-like protein-300B (MLP-300B); CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: Mannose-binding lectin superfamily protein (TAIR:AT3G16450.3); Has 1615 Blast hits to 760 proteins in 47 species: Archae - 0; Bacteria - 26; Metazoa - 0; Fungi - 2; Plants - 1582; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5585872..5587798
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338232.1 → NP_001325457.1  myrosinase-binding protein-like protein-300B [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VKW8, A0A1I9LLA7

    2. NM_112515.5 → NP_188265.1  myrosinase-binding protein-like protein-300B [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188265.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O04312, Q0WTT8
      UniProtKB/TrEMBL
      A0A5S9XCW2
      Conserved Domains (1) summary
      pfam01419
      Location:165 → 297
      Jacalin; Jacalin-like lectin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O04312.1

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