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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001360890.1 → NP_001347819.1 E3 ubiquitin-protein ligase RNF180 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC154203, BC075700
- Consensus CDS
-
CCDS88517.1
- Related
- ENSMUSP00000153478.2, ENSMUST00000226044.2
- Conserved Domains (1) summary
-
- cd16554
Location:431 → 473
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
NM_001360891.1 → NP_001347820.1 E3 ubiquitin-protein ligase RNF180 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC154203, AC175380, AK151379, CJ302269
- Consensus CDS
-
CCDS88518.1
- UniProtKB/Swiss-Prot
- Q3U827, Q3UW39, Q80ZX1, Q8CCR1, Q9CXV6
- Related
- ENSMUSP00000153506.2, ENSMUST00000224662.2
- Conserved Domains (1) summary
-
- cd16554
Location:432 → 474
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
NM_027934.2 → NP_082210.1 E3 ubiquitin-protein ligase RNF180 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AK136632
- Consensus CDS
-
CCDS36775.1
- UniProtKB/Swiss-Prot
-
Q3U827
- Related
- ENSMUSP00000153678.2, ENSMUST00000224011.2
- Conserved Domains (1) summary
-
- cd00162
Location:431 → 477
- RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000079.7 Reference GRCm39 C57BL/6J
- Range
-
105267075..105431406 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030247413.2 → XP_030103273.1 E3 ubiquitin-protein ligase RNF180 isoform X5
- UniProtKB/Swiss-Prot
- Q3U827, Q3UW39, Q80ZX1, Q8CCR1, Q9CXV6
- Conserved Domains (1) summary
-
- cd16554
Location:432 → 474
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
XM_017315607.3 → XP_017171096.1 E3 ubiquitin-protein ligase RNF180 isoform X6
- UniProtKB/Swiss-Prot
-
Q3U827
- Conserved Domains (1) summary
-
- cd16554
Location:431 → 473
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
XM_006517759.5 → XP_006517822.1 E3 ubiquitin-protein ligase RNF180 isoform X5
- UniProtKB/Swiss-Prot
- Q3U827, Q3UW39, Q80ZX1, Q8CCR1, Q9CXV6
- Conserved Domains (1) summary
-
- cd16554
Location:432 → 474
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
XM_030247414.1 → XP_030103274.1 E3 ubiquitin-protein ligase RNF180 isoform X6
- Conserved Domains (1) summary
-
- cd16554
Location:431 → 473
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
XM_030247412.1 → XP_030103272.1 E3 ubiquitin-protein ligase RNF180 isoform X4
- Conserved Domains (1) summary
-
- cd16554
Location:432 → 474
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
XM_006517756.4 → XP_006517819.1 E3 ubiquitin-protein ligase RNF180 isoform X3
- Conserved Domains (1) summary
-
- cd16554
Location:433 → 475
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
XM_006517760.3 → XP_006517823.1 E3 ubiquitin-protein ligase RNF180 isoform X5
- UniProtKB/Swiss-Prot
- Q3U827, Q3UW39, Q80ZX1, Q8CCR1, Q9CXV6
- Conserved Domains (1) summary
-
- cd16554
Location:432 → 474
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
XM_006517761.5 → XP_006517824.4 E3 ubiquitin-protein ligase RNF180 isoform X1
- Conserved Domains (1) summary
-
- cd16554
Location:481 → 523
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
XM_011244696.4 → XP_011242998.2 E3 ubiquitin-protein ligase RNF180 isoform X2
- Conserved Domains (1) summary
-
- cd16554
Location:480 → 522
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
XM_036158170.1 → XP_036014063.1 E3 ubiquitin-protein ligase RNF180 isoform X9
- Conserved Domains (1) summary
-
- cd16554
Location:431 → 473
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
XM_036158171.1 → XP_036014064.1 E3 ubiquitin-protein ligase RNF180 isoform X9
- Conserved Domains (1) summary
-
- cd16554
Location:431 → 473
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
XM_036158168.1 → XP_036014061.1 E3 ubiquitin-protein ligase RNF180 isoform X8
- Conserved Domains (1) summary
-
- cd16554
Location:480 → 522
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
XM_036158169.1 → XP_036014062.1 E3 ubiquitin-protein ligase RNF180 isoform X7
- Conserved Domains (1) summary
-
- cd16554
Location:432 → 474
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
XM_036158167.1 → XP_036014060.1 E3 ubiquitin-protein ligase RNF180 isoform X7
- Conserved Domains (1) summary
-
- cd16554
Location:432 → 474
- RING-HC_RNF180; RING finger, HC subclass, found in RING finger protein 180 (RNF180) and similar proteins
-
XM_036158175.1 → XP_036014068.1 E3 ubiquitin-protein ligase RNF180 isoform X12
-
XM_036158172.1 → XP_036014065.1 E3 ubiquitin-protein ligase RNF180 isoform X10
-
XM_036158174.1 → XP_036014067.1 E3 ubiquitin-protein ligase RNF180 isoform X12
-
XM_036158173.1 → XP_036014066.1 E3 ubiquitin-protein ligase RNF180 isoform X11