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    atos atossa [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36243, updated on 9-Dec-2024

    Summary

    Official Symbol
    atosprovided by FlyBase
    Official Full Name
    atossaprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033638
    Locus tag
    Dmel_CG9005
    See related
    AllianceGenome:FB:FBgn0033638
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:GH05710; CG9005; Dmel\CG9005; mda
    Summary
    Involved in positive regulation of gene expression. Is active in nucleus. Is expressed in several structures, including anterior endoderm; anterior endoderm anlage; apoptotic amnioserosa; embryonic/larval midgut primordium; and mesoderm. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See atos in Genome Data Viewer
    Location:
    48A3-48B2; 2-64 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (11619479..11640941, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (7506984..7528446, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43907 Neighboring gene Enigma Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    General gene information

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in nucleus PubMed 

    General protein information

    Preferred Names
    atossa
    Names
    CG9005-PA
    CG9005-PB
    CG9005-PC
    CG9005-PE
    atos-PA
    atos-PB
    atos-PC
    atos-PE
    medusa

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      11619479..11640941 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001169647.3 → NP_001163118.1  atossa, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163118.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7JXG9
      Conserved Domains (2) summary
      pfam13889
      Location:1226 → 1290
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:1074 → 1132
      DUF4210; Domain of unknown function (DUF4210)
    2. NM_001382201.1 → NP_001369081.1  atossa, isoform E [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A6M3Q835
      Conserved Domains (2) summary
      pfam13889
      Location:1226 → 1290
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:1074 → 1131
      DUF4210; Domain of unknown function (DUF4210)
    3. NM_001259338.3 → NP_001246267.1  atossa, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246267.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7JXG9
      Conserved Domains (2) summary
      pfam13889
      Location:1226 → 1290
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:1074 → 1132
      DUF4210; Domain of unknown function (DUF4210)
    4. NM_136844.4 → NP_610688.1  atossa, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610688.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7JXG9
      Related
      FBpp0087191
      Conserved Domains (2) summary
      pfam13889
      Location:1226 → 1290
      Chromosome_seg; Chromosome segregation during meiosis
      pfam13915
      Location:1074 → 1132
      DUF4210; Domain of unknown function (DUF4210)
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