U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CARMIL1 capping protein regulator and myosin 1 linker 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694909, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CARMIL1provided by VGNC
    Official Full Name
    capping protein regulator and myosin 1 linker 1provided by VGNC
    Primary source
    VGNC:VGNC:70602
    See related
    Ensembl:ENSMMUG00000002573
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CARMIL1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    43
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (144374491..144719830, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (25859979..26205671)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 17 member 1 Neighboring gene uncharacterized LOC114677676 Neighboring gene H2A clustered histone 1 Neighboring gene secretagogin, EF-hand calcium binding protein Neighboring gene small nucleolar RNA U13 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L21 pseudogene Neighboring gene soluble calcium-activated nucleotidase 1 pseudogene

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of Arp2/3 complex-mediated actin nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lamellipodium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    F-actin-uncapping protein LRRC16A
    Names
    leucine-rich repeat-containing protein 16A
    leucine-rich repeat-containing protein 16A-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      144374491..144719830 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028847799.1 → XP_028703632.1  F-actin-uncapping protein LRRC16A isoform X12

      UniProtKB/TrEMBL
      A0A5F8AJ01
      Conserved Domains (4) summary
      sd00033
      Location:405 → 428
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:165 → 194
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:707 → 1010
      CARMIL_C; CARMIL C-terminus
      cl29113
      Location:146 → 290
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    2. XM_028847797.1 → XP_028703630.1  F-actin-uncapping protein LRRC16A isoform X9

      UniProtKB/TrEMBL
      A0A5F8AMK2
      Related
      ENSMMUP00000079058.1, ENSMMUT00000089777.1
      Conserved Domains (4) summary
      sd00033
      Location:278 → 306
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:248 → 277
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:757 → 1060
      CARMIL_C; CARMIL C-terminus
      cl29113
      Location:229 → 373
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    3. XM_028847794.1 → XP_028703627.1  F-actin-uncapping protein LRRC16A isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZH71
      Conserved Domains (4) summary
      sd00033
      Location:278 → 306
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:248 → 277
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:790 → 1093
      CARMIL_C; CARMIL C-terminus
      cl29113
      Location:229 → 373
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    4. XM_028847795.1 → XP_028703628.1  F-actin-uncapping protein LRRC16A isoform X4

      UniProtKB/TrEMBL
      A0A5F7ZH71
      Related
      ENSMMUP00000075265.1, ENSMMUT00000082839.1
      Conserved Domains (4) summary
      sd00033
      Location:278 → 306
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:248 → 277
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:786 → 1089
      CARMIL_C; CARMIL C-terminus
      cl29113
      Location:281 → 595
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    5. XM_028847796.1 → XP_028703629.1  F-actin-uncapping protein LRRC16A isoform X6

      UniProtKB/TrEMBL
      A0A5F8A544
      Conserved Domains (4) summary
      sd00033
      Location:488 → 511
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:248 → 277
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:790 → 1087
      CARMIL_C; CARMIL C-terminus
      cl29113
      Location:229 → 373
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    6. XM_015135686.2 → XP_014991172.1  F-actin-uncapping protein LRRC16A isoform X5

      UniProtKB/TrEMBL
      A0A5F7ZH71
      Related
      ENSMMUP00000064520.1, ENSMMUT00000087333.1
      Conserved Domains (4) summary
      cd00116
      Location:229 → 373
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:278 → 306
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:248 → 277
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:790 → 1088
      CARMIL_C; CARMIL C-terminus

    7. XM_028847793.1 → XP_028703626.1  F-actin-uncapping protein LRRC16A isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZH71
      Conserved Domains (5) summary
      PTZ00449
      Location:1223 → 1370
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      sd00033
      Location:278 → 306
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:248 → 277
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:790 → 1093
      CARMIL_C; CARMIL C-terminus
      cl29113
      Location:229 → 373
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    8. XM_028847792.1 → XP_028703625.1  F-actin-uncapping protein LRRC16A isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZH71
      Conserved Domains (4) summary
      sd00033
      Location:278 → 306
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:248 → 277
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:790 → 1093
      CARMIL_C; CARMIL C-terminus
      cl29113
      Location:229 → 373
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    9. XM_015135692.2 → XP_014991178.1  F-actin-uncapping protein LRRC16A isoform X8

      UniProtKB/TrEMBL
      A0A5F8A544
      Conserved Domains (4) summary
      cd00116
      Location:281 → 595
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:278 → 306
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:248 → 277
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:786 → 1078
      CARMIL_C; CARMIL C-terminus

    10. XM_015135691.2 → XP_014991177.1  F-actin-uncapping protein LRRC16A isoform X7

      UniProtKB/TrEMBL
      A0A5F8A544
      Related
      ENSMMUP00000072052.1, ENSMMUT00000106976.1
      Conserved Domains (4) summary
      cd00116
      Location:229 → 373
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:488 → 511
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:248 → 277
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:790 → 1082
      CARMIL_C; CARMIL C-terminus

    11. XM_028847798.1 → XP_028703631.1  F-actin-uncapping protein LRRC16A isoform X10

      UniProtKB/TrEMBL
      F7HSJ9
      Related
      ENSMMUP00000003464.4, ENSMMUT00000003666.4
      Conserved Domains (5) summary
      PTZ00449
      Location:1223 → 1335
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      sd00033
      Location:278 → 306
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:248 → 277
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:790 → 1093
      CARMIL_C; CARMIL C-terminus
      cl29113
      Location:229 → 373
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    12. XM_028847801.1 → XP_028703634.1  F-actin-uncapping protein LRRC16A isoform X13

      UniProtKB/TrEMBL
      F7HSK1
      Related
      ENSMMUP00000003463.4, ENSMMUT00000003665.4
      Conserved Domains (5) summary
      PTZ00449
      Location:1223 → 1335
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      sd00033
      Location:278 → 306
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:248 → 277
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:790 → 1093
      CARMIL_C; CARMIL C-terminus
      cl29113
      Location:229 → 373
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

    13. XM_015135695.2 → XP_014991181.1  F-actin-uncapping protein LRRC16A isoform X11

      UniProtKB/TrEMBL
      G7MQV1, I2CUX1
      Related
      ENSMMUP00000067342.1, ENSMMUT00000108323.1
      Conserved Domains (4) summary
      cd00116
      Location:281 → 595
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:278 → 306
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:248 → 277
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:786 → 1078
      CARMIL_C; CARMIL C-terminus

    14. XM_028847800.1 → XP_028703633.1  F-actin-uncapping protein LRRC16A isoform X12

      UniProtKB/TrEMBL
      A0A5F8AJ01
      Conserved Domains (4) summary
      sd00033
      Location:405 → 428
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:165 → 194
      LRR_AMN1; leucine-rich repeat [structural motif]
      pfam16000
      Location:707 → 1010
      CARMIL_C; CARMIL C-terminus
      cl29113
      Location:146 → 290
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.