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    YBEY ybeY metalloendoribonuclease [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 721807, updated on 17-Aug-2024

    Summary

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    Official Symbol
    YBEYprovided by VGNC
    Official Full Name
    ybeY metalloendoribonucleaseprovided by VGNC
    Primary source
    VGNC:VGNC:78866
    See related
    Ensembl:ENSMMUG00000012911
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C21orf57
    Orthologs
    human mouse all
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    Genomic context

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    See YBEY in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (482048..495951, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (475799..485382, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene pericentrin Neighboring gene uncharacterized LOC114676782 Neighboring gene chromosome 3 C21orf58 homolog Neighboring gene minichromosome maintenance complex component 3 associated protein Neighboring gene uncharacterized LOC106997207 Neighboring gene lanosterol synthase Neighboring gene uncharacterized LOC106997208 Neighboring gene spermatogenesis and centriole associated 1 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    endoribonuclease YbeY
    Names
    rRNA maturation factor homolog
    ybeY metallopeptidase (putative)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265798.1 → NP_001252727.1  endoribonuclease YbeY

      See identical proteins and their annotated locations for NP_001252727.1

      Status: PROVISIONAL

      Source sequence(s)
      JV636225
      UniProtKB/TrEMBL
      F6S0T8, H9EZ73
      Related
      ENSMMUP00000016953.4, ENSMMUT00000018108.4
      Conserved Domains (1) summary
      TIGR00043
      Location:35 → 149
      TIGR00043; rRNA maturation RNase YbeY

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      482048..495951 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028845074.1 → XP_028700907.1  endoribonuclease YbeY isoform X3

      Conserved Domains (1) summary
      cl00402
      Location:29 → 91
      UPF0054; Uncharacterized protein family UPF0054

    2. XM_028845073.1 → XP_028700906.1  endoribonuclease YbeY isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZYC0
      Related
      ENSMMUP00000070657.1, ENSMMUT00000109411.1
      Conserved Domains (1) summary
      TIGR00043
      Location:35 → 136
      TIGR00043; rRNA maturation RNase YbeY

    3. XM_028845075.1 → XP_028700908.1  endoribonuclease YbeY isoform X5

      UniProtKB/TrEMBL
      G7MM97
      Conserved Domains (1) summary
      TIGR00043
      Location:35 → 136
      TIGR00043; rRNA maturation RNase YbeY

    4. XM_015132654.2 → XP_014988140.1  endoribonuclease YbeY isoform X6

      Conserved Domains (2) summary
      cl00402
      Location:29 → 104
      UPF0054; Uncharacterized protein family UPF0054
      cl26642
      Location:4 → 32
      SBDS_C; SBDS protein C-terminal domain

    5. XM_015132652.2 → XP_014988138.1  endoribonuclease YbeY isoform X4

      UniProtKB/TrEMBL
      F6S0T8, H9EZ73
      Conserved Domains (1) summary
      TIGR00043
      Location:35 → 149
      TIGR00043; rRNA maturation RNase YbeY

    6. XM_015132651.2 → XP_014988137.1  endoribonuclease YbeY isoform X2

      Conserved Domains (1) summary
      TIGR00043
      Location:35 → 140
      TIGR00043; rRNA maturation RNase YbeY

    RNA

    1. XR_003727744.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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