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    Calmodulin-binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816966, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Calmodulin-binding protein
    Primary source
    TAIR:AT2G24300
    Locus tag
    AT2G24300
    See related
    Araport:AT2G24300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T28I24.3; T28I24_3
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (10340785..10343736)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene zinc finger, C3HC4 type (RING finger) family protein Neighboring gene ubiquitin-associated protein (DUF1068) Neighboring gene ncRNA Neighboring gene TPRXL Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene integral membrane metal-binding family protein (DUF2296)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Apoplastic calmodulin receptor-like binding proteins in suspension-cultured cells of Arabidopsis thaliana. Cui S, et al. J Biol Chem, 2005 Sep 9. PMID 16000297
    2. Genes encoding calmodulin-binding proteins in the Arabidopsis genome. Reddy VS, et al. J Biol Chem, 2002 Mar 22. PMID 11782485
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. first evidence for the presence of apoplastic calmodulin receptor-like binding proteins on the cell surface of Arabidopsis suspension-cultured cells
      Title: Apoplastic calmodulin receptor-like binding proteins in suspension-cultured cells of Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_127992.3
    NM_201798.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables calmodulin binding TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Calmodulin-binding protein
    NP_180007.2
    • Calmodulin-binding protein; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G31000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_973527.1
    • Calmodulin-binding protein; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G31000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10340785..10343736
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335930.1 → NP_001324505.1  Calmodulin-binding protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B0C9, A0A5S9X0Q9, A0A654F0Q9, A0A7G2EC58
      Conserved Domains (1) summary
      pfam07887
      Location:93 → 385
      Calmodulin_bind; Calmodulin binding protein-like

    2. NM_127992.3 → NP_180007.2  Calmodulin-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180007.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F0Q9, A0A7G2EC58
      Conserved Domains (1) summary
      pfam07887
      Location:42 → 337
      Calmodulin_bind; Calmodulin binding protein-like

    3. NM_201798.1 → NP_973527.1  Calmodulin-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973527.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IPM3, F4IPM4, Q9ZQ37
      UniProtKB/TrEMBL
      A0A654F0Q9, A0A7G2EC58
      Conserved Domains (1) summary
      pfam07887
      Location:89 → 384
      Calmodulin_bind; Calmodulin binding protein-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4IPM3.1

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