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    2-aminoethanethiol dioxygenase, putative (DUF1637) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825036, updated on 18-Sep-2024

    Summary

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    Official Full Name
    2-aminoethanethiol dioxygenase, putative (DUF1637)
    Primary source
    TAIR:AT3G58670
    Locus tag
    AT3G58670
    See related
    Araport:AT3G58670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    PCO5; plant cysteine oxidase 5
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (21703385..21706137, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene GPI-anchored adhesin-like protein Neighboring gene Ribosomal protein L1p/L10e family Neighboring gene multiprotein bridging factor 1B Neighboring gene Protein kinase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The plant cysteine oxidases from Arabidopsis thaliana are kinetically tailored to act as oxygen sensors. White MD, et al. J Biol Chem, 2018 Jul 27. PMID 29848548, Free PMC Article
    2. Molecular basis for cysteine oxidation by plant cysteine oxidases from Arabidopsis thaliana. Chen Z, et al. J Struct Biol, 2021 Mar. PMID 33207269
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001084841.2
    NM_001203199.1
    NM_001339929.1
    NM_115729.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cysteine dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to hypoxia IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in detection of hypoxia IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in peptidyl-cysteine oxidation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    2-aminoethanethiol dioxygenase, putative (DUF1637)
    NP_001078310.1
    • Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT2G42670.1); Has 361 Blast hits to 361 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
    NP_001190128.1
    • Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT2G42670.1).
    NP_191426.1
    • Protein of unknown function (DUF1637); FUNCTIONS IN: cysteamine dioxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1637 (InterPro:IPR012864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1637) (TAIR:AT2G42670.1); Has 361 Blast hits to 361 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 103; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      21703385..21706137 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115729.4 → NP_191426.1  2-aminoethanethiol dioxygenase, putative (DUF1637) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191426.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LXT4
      UniProtKB/TrEMBL
      A0A178VPR6, A0A5S9XM05, A0A654FJ00
      Conserved Domains (1) summary
      pfam07847
      Location:33 → 240
      PCO_ADO

    2. NM_001339929.1 → NP_001326765.1  2-aminoethanethiol dioxygenase, putative (DUF1637) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VPR6, A0A1I9LQA0

    3. NM_001084841.2 → NP_001078310.1  2-aminoethanethiol dioxygenase, putative (DUF1637) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078310.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LXT4
      UniProtKB/TrEMBL
      A0A178VPR6, A0A5S9XM05, A0A654FJ00
      Conserved Domains (1) summary
      pfam07847
      Location:33 → 240
      PCO_ADO

    4. NM_001203199.1 → NP_001190128.1  2-aminoethanethiol dioxygenase, putative (DUF1637) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190128.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LXT4
      UniProtKB/TrEMBL
      A0A178VPR6, A0A5S9XM05, A0A654FJ00
      Conserved Domains (1) summary
      pfam07847
      Location:33 → 240
      PCO_ADO
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LXT4.1

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