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    emb2184 Ribosomal protein L31 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843871, updated on 18-Sep-2024

    Summary

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    Official Symbol
    emb2184
    Official Full Name
    Ribosomal protein L31
    Primary source
    TAIR:AT1G75350
    Locus tag
    AT1G75350
    See related
    Araport:AT1G75350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    embryo defective 2184; F1B16.11; F1B16_11
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    Genomic context

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    See emb2184 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (28272071..28273009)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene auxin-like 1 protein Neighboring gene ornithine carbamoyltransferase Neighboring gene nucleolar-like protein Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein Neighboring gene uncharacterized protein Neighboring gene Sec14p-like phosphatidylinositol transfer family protein Neighboring gene bifunctional nuclease in basal defense response 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Redox Conformation-Specific Protein-Protein Interactions of the 2-Cysteine Peroxiredoxin in Arabidopsis. Liebthal M, et al. Antioxidants (Basel), 2020 Jun 11. PMID 32545358, Free PMC Article
    2. The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Peltier JB, et al. Mol Cell Proteomics, 2006 Jan. PMID 16207701
    3. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. Froehlich JE, et al. J Proteome Res, 2003 Jul-Aug. PMID 12938931
    4. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
    5. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_106189.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy NAS
    Non-traceable Author Statement
    more info
    		  
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast envelope HDA PubMed 
    located_in chloroplast stroma HDA PubMed 
    located_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    Ribosomal protein L31
    NP_565109.1
    • embryo defective 2184 (emb2184); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis, embryo development ending in seed dormancy; LOCATED IN: ribosome, chloroplast, chloroplast stroma, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L31 (InterPro:IPR002150); Has 1009 Blast hits to 1009 proteins in 370 species: Archae - 0; Bacteria - 720; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 230 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28272071..28273009
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106189.4 → NP_565109.1  Ribosomal protein L31 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565109.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FWS4
      UniProtKB/TrEMBL
      A0A178WG49, A0A5S9WUK7
      Conserved Domains (1) summary
      cl00377
      Location:50 → 115
      Ribosomal_L31; Ribosomal protein L31
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FWS4.1

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