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    RECA3 RECA homolog 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820177, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RECA3
    Official Full Name
    RECA homolog 3
    Primary source
    TAIR:AT3G10140
    Locus tag
    AT3G10140
    See related
    Araport:AT3G10140
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    RECA homolog 3
    Summary
    Encodes a gene involved in plant mitochondrial recombination surveillance. Disruption of this gene in combination with a mutation in MSH1 results in extensive rearrangement of the mitochondrial genome and dramatic changes in plant growth.
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    Genomic context

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    See RECA3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (3134873..3137417)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene SOUL heme-binding family protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene purple acid phosphatase 16 Neighboring gene ncRNA Neighboring gene DHFS-FPGS homolog C

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RecA-dependent DNA repair results in increased heteroplasmy of the Arabidopsis mitochondrial genome. Miller-Messmer M, et al. Plant Physiol, 2012 May. PMID 22415515, Free PMC Article
    2. Extensive rearrangement of the Arabidopsis mitochondrial genome elicits cellular conditions for thermotolerance. Shedge V, et al. Plant Physiol, 2010 Apr. PMID 20139171, Free PMC Article
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_111849.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP-dependent DNA damage sensor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables single-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within mitochondrial genome maintenance IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within response to heat IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    RECA homolog 3
    NP_187625.2
    • RECA homolog 3 (RECA3); FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: recA DNA recombination family protein (TAIR:AT2G19490.1); Has 19406 Blast hits to 19280 proteins in 5632 species: Archae - 329; Bacteria - 14407; Metazoa - 165; Fungi - 231; Plants - 211; Viruses - 99; Other Eukaryotes - 3964 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3134873..3137417
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111849.4 → NP_187625.2  RECA homolog 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187625.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RY99, Q9SR78
      UniProtKB/TrEMBL
      A0A178VLS0
      Conserved Domains (2) summary
      PRK09354
      Location:60 → 386
      recA; recombinase A; Provisional
      cl21455
      Location:61 → 388
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8RY99.1

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