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    golm1 golgi membrane protein 1 [ Danio rerio (zebrafish) ]

    Gene ID: 393249, updated on 9-Dec-2024

    Summary

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    Official Symbol
    golm1provided by ZNC
    Official Full Name
    golgi membrane protein 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1060
    See related
    Ensembl:ENSDARG00000025858 AllianceGenome:ZFIN:ZDB-GENE-040426-1060
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:56525; zgc:77193
    Summary
    Acts upstream of or within response to steroid hormone. Predicted to be located in membrane. Predicted to be active in Golgi apparatus. Is expressed in ovary. Orthologous to human GOLM1 (golgi membrane protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See golm1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (49092017..49112036)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (49103248..49123267)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene AP2 associated kinase 1a Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 Neighboring gene RAD21 cohesin complex component like 1 Neighboring gene syntaphilin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Fine selection of up-regulated genes during ovulation by in vivo induction of oocyte maturation and ovulation in zebrafish. Klangnurak W, et al. Zoological Lett, 2017. PMID 28265462, Free PMC Article
    2. A zebrafish model of intrahepatic cholangiocarcinoma by dual expression of hepatitis B virus X and hepatitis C virus core protein in liver. Liu W, et al. Hepatology, 2012 Dec. PMID 22729936
    3. Evolution of complexity in the zebrafish synapse proteome. Bayés À, et al. Nat Commun, 2017 Mar 2. PMID 28252024, Free PMC Article
    4. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC56525

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to steroid hormone IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Golgi membrane protein 1
    Names
    Golgi membrane protein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200279.2 → NP_956573.2  Golgi membrane protein 1

      Status: VALIDATED

      Source sequence(s)
      CU915766, EH477845, EH488804
      UniProtKB/TrEMBL
      A0A8M1PEA0, F1QI79
      Related
      ENSDARP00000032153.6, ENSDART00000032355.7
      Conserved Domains (2) summary
      PTZ00108
      Location:42 → 336
      PTZ00108; DNA topoisomerase 2-like protein; Provisional
      TIGR00927
      Location:283 → 410
      2A1904; K+-dependent Na+/Ca+ exchanger

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      49092017..49112036
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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