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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_021308.2 RefSeqGene
- Range
-
5026..196593
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_015032.4 → NP_055847.1 sister chromatid cohesion protein PDS5 homolog B
See identical proteins and their annotated locations for NP_055847.1
Status: REVIEWED
- Source sequence(s)
-
AB023196, AL137201, DA856411
- Consensus CDS
-
CCDS41878.1
- UniProtKB/Swiss-Prot
- Q5R3S3, Q5W0K8, Q6NSC3, Q8IXT6, Q9H5N8, Q9NTI5, Q9Y2I5, Q9Y451
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
- Related
- ENSP00000313851.10, ENST00000315596.15
- Conserved Domains (3) summary
-
- PTZ00449
Location:1215 → 1410
- PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
- sd00044
Location:240 → 261
- HEAT; HEAT repeat [structural motif]
- cd19953
Location:31 → 661
- PDS5; Sister chromatid cohesion protein PDS5
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000013.11 Reference GRCh38.p14 Primary Assembly
- Range
-
32586452..32778019
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005266298.5 → XP_005266355.1 sister chromatid cohesion protein PDS5 homolog B isoform X1
See identical proteins and their annotated locations for XP_005266355.1
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
- Conserved Domains (3) summary
-
- PTZ00449
Location:1042 → 1295
- PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
- sd00044
Location:240 → 261
- HEAT; HEAT repeat [structural motif]
- cd19953
Location:31 → 661
- PDS5; Sister chromatid cohesion protein PDS5
-
XM_017020452.3 → XP_016875941.1 sister chromatid cohesion protein PDS5 homolog B isoform X4
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
- Conserved Domains (3) summary
-
- PTZ00449
Location:1042 → 1295
- PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
- sd00044
Location:240 → 261
- HEAT; HEAT repeat [structural motif]
- cd19953
Location:31 → 661
- PDS5; Sister chromatid cohesion protein PDS5
-
XM_011534999.3 → XP_011533301.1 sister chromatid cohesion protein PDS5 homolog B isoform X2
See identical proteins and their annotated locations for XP_011533301.1
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
- Conserved Domains (2) summary
-
- sd00044
Location:240 → 261
- HEAT; HEAT repeat [structural motif]
- cd19953
Location:31 → 661
- PDS5; Sister chromatid cohesion protein PDS5
-
XM_011535000.3 → XP_011533302.1 sister chromatid cohesion protein PDS5 homolog B isoform X3
See identical proteins and their annotated locations for XP_011533302.1
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
- Conserved Domains (3) summary
-
- PTZ00449
Location:1205 → 1408
- PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
- sd00044
Location:240 → 261
- HEAT; HEAT repeat [structural motif]
- cd19953
Location:31 → 661
- PDS5; Sister chromatid cohesion protein PDS5
-
XM_017020453.2 → XP_016875942.1 sister chromatid cohesion protein PDS5 homolog B isoform X5
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
- Conserved Domains (2) summary
-
- pfam05029
Location:1173 → 1301
- TIMELESS_C; Timeless protein C terminal region
- sd00044
Location:240 → 261
- HEAT; HEAT repeat [structural motif]
-
XM_047430186.1 → XP_047286142.1 sister chromatid cohesion protein PDS5 homolog B isoform X1
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
-
XM_017020448.2 → XP_016875937.1 sister chromatid cohesion protein PDS5 homolog B isoform X1
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
- Conserved Domains (3) summary
-
- PTZ00449
Location:1042 → 1295
- PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
- sd00044
Location:240 → 261
- HEAT; HEAT repeat [structural motif]
- cd19953
Location:31 → 661
- PDS5; Sister chromatid cohesion protein PDS5
-
XM_011535002.4 → XP_011533304.1 sister chromatid cohesion protein PDS5 homolog B isoform X6
- Conserved Domains (2) summary
-
- pfam05029
Location:897 → 1027
- TIMELESS_C; Timeless protein C terminal region
- pfam13254
Location:927 → 1139
- DUF4045; Domain of unknown function (DUF4045)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060937.1 Alternate T2T-CHM13v2.0
- Range
-
31803785..31995311
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054374271.1 → XP_054230246.1 sister chromatid cohesion protein PDS5 homolog B isoform X7
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
-
XM_054374272.1 → XP_054230247.1 sister chromatid cohesion protein PDS5 homolog B isoform X8
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
-
XM_054374280.1 → XP_054230255.1 sister chromatid cohesion protein PDS5 homolog B isoform X11
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
-
XM_054374273.1 → XP_054230248.1 sister chromatid cohesion protein PDS5 homolog B isoform X9
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
-
XM_054374274.1 → XP_054230249.1 sister chromatid cohesion protein PDS5 homolog B isoform X10
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
-
XM_054374281.1 → XP_054230256.1 sister chromatid cohesion protein PDS5 homolog B isoform X12
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
-
XM_054374275.1 → XP_054230250.1 sister chromatid cohesion protein PDS5 homolog B isoform X1
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
-
XM_054374282.1 → XP_054230257.1 sister chromatid cohesion protein PDS5 homolog B isoform X4
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
-
XM_054374278.1 → XP_054230253.1 sister chromatid cohesion protein PDS5 homolog B isoform X2
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
-
XM_054374279.1 → XP_054230254.1 sister chromatid cohesion protein PDS5 homolog B isoform X3
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
-
XM_054374283.1 → XP_054230258.1 sister chromatid cohesion protein PDS5 homolog B isoform X5
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
-
XM_054374276.1 → XP_054230251.1 sister chromatid cohesion protein PDS5 homolog B isoform X1
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
-
XM_054374277.1 → XP_054230252.1 sister chromatid cohesion protein PDS5 homolog B isoform X1
- UniProtKB/TrEMBL
- B7Z5S1, E9PHV0
-
XM_054374284.1 → XP_054230259.1 sister chromatid cohesion protein PDS5 homolog B isoform X6
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_015928.1: Suppressed sequence
- Description
- NM_015928.1: This RefSeq was permanently suppressed because it is a nonsense-mediated decay (NMD) candidate.