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    O-fucosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819696, updated on 18-Sep-2024

    Summary

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    Official Full Name
    O-fucosyltransferase family protein
    Primary source
    TAIR:AT3G05320
    Locus tag
    AT3G05320
    See related
    Araport:AT3G05320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T12H1.29; T12H1_29
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (1513062..1515568, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene peroxisomal adenine nucleotide carrier 1 Neighboring gene Cytidine/deoxycytidylate deaminase family protein Neighboring gene MIRO-related GTP-ase 3 Neighboring gene Cyclin family protein Neighboring gene cyclin family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Putative Protein O-Fucosyltransferase Facilitates Pollen Tube Penetration through the Stigma-Style Interface. Smith DK, et al. Plant Physiol, 2018 Apr. PMID 29467178, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Results indicate that O-FUCOSYLTRANSFERASE1 (AtOFT1) mutant pollen tubes have a reduced ability to penetrate the stigma-style interface.
      Title: A Putative Protein O-Fucosyltransferase Facilitates Pollen Tube Penetration through the Stigma-Style Interface.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_111405.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in pollen-pistil interaction IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within pollination IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    colocalizes_with Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    O-fucosyltransferase family protein
    NP_187183.3
    • O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1513062..1515568 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337578.1 → NP_001327824.1  O-fucosyltransferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8H0U6, Q9MA87
      UniProtKB/TrEMBL
      A0A178VJL4, A0A5S9X9L3
      Conserved Domains (1) summary
      cd11296
      Location:69 → 384
      O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

    2. NM_001337577.1 → NP_001327823.1  O-fucosyltransferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8H0U6, Q9MA87
      UniProtKB/TrEMBL
      A0A178VJL4, A0A5S9X9L3
      Conserved Domains (1) summary
      cd11296
      Location:69 → 384
      O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

    3. NM_111405.4 → NP_187183.3  O-fucosyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187183.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8H0U6, Q9MA87
      UniProtKB/TrEMBL
      A0A178VJL4, A0A5S9X9L3
      Conserved Domains (1) summary
      cd11296
      Location:69 → 384
      O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9MA87.1

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