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    IQD22 IQ-domain 22 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828405, updated on 18-Sep-2024

    Summary

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    Official Symbol
    IQD22
    Official Full Name
    IQ-domain 22
    Primary source
    TAIR:AT4G23060
    Locus tag
    AT4G23060
    See related
    Araport:AT4G23060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7H19.250; F7H19_250; IQ-domain 22
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    Genomic context

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    See IQD22 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (12086898..12090714)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene PAS domain-containing protein tyrosine kinase family protein Neighboring gene ncRNA Neighboring gene RHOMBOID-like protein 7 Neighboring gene transmembrane protein, putative (DUF239) Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global analysis of della direct targets in early gibberellin signaling in Arabidopsis. Zentella R, et al. Plant Cell, 2007 Oct. PMID 17933900, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_118435.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to gibberellin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    IQ-domain 22
    NP_194037.2
    • IQ-domain 22 (IQD22); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 26 (TAIR:AT3G16490.1); Has 890 Blast hits to 763 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 3; Plants - 728; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12086898..12090714
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118435.5 → NP_194037.2  IQ-domain 22 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194037.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82755, Q2NNE0
      UniProtKB/TrEMBL
      A0A178UVE9, A0A654FRX6
      Conserved Domains (2) summary
      pfam13178
      Location:367 → 425
      DUF4005; Protein of unknown function (DUF4005)
      cd21759
      Location:169 → 219
      CBD_MYO6-like; calmodulin binding domain found in unconventional myosin-VI and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2NNE0.1

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