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    UCC1 uclacyanin 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817791, updated on 18-Sep-2024

    Summary

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    Official Symbol
    UCC1
    Official Full Name
    uclacyanin 1
    Primary source
    TAIR:AT2G32300
    Locus tag
    AT2G32300
    See related
    Araport:AT2G32300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    uclacyanin 1
    Summary
    Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods.
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    Genomic context

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    See UCC1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (13722362..13723641)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene EXS (ERD1/XPR1/SYG1) family protein Neighboring gene CCT motif family protein Neighboring gene ncRNA Neighboring gene tRNAHis guanylyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Uclacyanin Proteins Are Required for Lignified Nanodomain Formation within Casparian Strips. Reyt G, et al. Curr Biol, 2020 Oct 19. PMID 32857976, Free PMC Article
    2. Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. Borner GH, et al. Plant Physiol, 2003 Jun. PMID 12805588, Free PMC Article
    3. Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. Borner GH, et al. Plant Physiol, 2002 Jun. PMID 12068095, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Uclacyanin Proteins Are Required for Lignified Nanodomain Formation within Casparian Strips.
      Title: Uclacyanin Proteins Are Required for Lignified Nanodomain Formation within Casparian Strips.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_128789.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uclacyanin 1
    NP_180789.1
    • uclacyanin 1 (UCC1); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT2G26720.1); Has 7686 Blast hits to 4254 proteins in 462 species: Archae - 22; Bacteria - 692; Metazoa - 1349; Fungi - 628; Plants - 1950; Viruses - 176; Other Eukaryotes - 2869 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13722362..13723641
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336386.1 → NP_001325251.1  uclacyanin 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B2P6
      Conserved Domains (1) summary
      cd04216
      Location:54 → 151
      Phytocyanin; Phytocyanins are plant blue or type I copper proteins

    2. NM_128789.3 → NP_180789.1  uclacyanin 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180789.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82081, Q0WPC5
      UniProtKB/TrEMBL
      A0A178VPT0, A0A5S9X384
      Conserved Domains (1) summary
      cd04216
      Location:24 → 121
      Phytocyanin; Phytocyanins are plant blue or type I copper proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O82081.1

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