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    Late embryogenesis abundant protein (LEA) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814911, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Late embryogenesis abundant protein (LEA) family protein
    Primary source
    TAIR:AT2G03850
    Locus tag
    AT2G03850
    See related
    Araport:AT2G03850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T18C20.5; T18C20_5
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (1175581..1176802)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene root meristem growth factor Neighboring gene tetraspanin13 Neighboring gene pseudo Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The ubiquitous distribution of late embryogenesis abundant proteins across cell compartments in Arabidopsis offers tailored protection against abiotic stress. Candat A, et al. Plant Cell, 2014 Jul. PMID 25005920, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_126431.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Late embryogenesis abundant protein (LEA) family protein
    NP_565306.1
    • Late embryogenesis abundant protein (LEA) family protein; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant domain-containing protein / LEA domain-containing protein (TAIR:AT2G03740.1); Has 577 Blast hits to 318 proteins in 93 species: Archae - 1; Bacteria - 101; Metazoa - 17; Fungi - 21; Plants - 408; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      1175581..1176802
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126431.4 → NP_565306.1  Late embryogenesis abundant protein (LEA) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565306.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9SI55
      Conserved Domains (2) summary
      pfam12732
      Location:130 → 186
      YtxH; YtxH-like protein
      cl02879
      Location:1 → 70
      Chloroa_b-bind; Chlorophyll A-B binding protein
    Nucleotide Protein
    Heading Accession and Version

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