NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_015851.1 RefSeqGene
- Range
-
5261..248588
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001166418.2 → NP_001159890.1 histone deacetylase 8 isoform 2
See identical proteins and their annotated locations for NP_001159890.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks two alternate exons in the 5' coding region, compared to variant 1, resulting in a protein (isoform 2) that maintains the reading frame but is shorter, compared to isoform 1.
- Source sequence(s)
-
AK296641, BC050433
- Consensus CDS
-
CCDS55449.1
- UniProtKB/TrEMBL
-
A0A3B3ISE4
- Related
- ENSP00000362691.4, ENST00000373589.9
- Conserved Domains (1) summary
-
- cl17011
Location:16 → 286
- Arginase_HDAC; Arginase-like and histone-like hydrolases
-
NM_001166419.2 → NP_001159891.1 histone deacetylase 8 isoform 3
See identical proteins and their annotated locations for NP_001159891.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks several alternate 3' exons and uses an alternate 3' terminal exon, compared to variant 1. The encoded isoform (3) has a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AK074326
- Consensus CDS
-
CCDS55451.1
- UniProtKB/TrEMBL
-
A0A3B3IRZ8
- Related
- ENSP00000414486.2, ENST00000439122.7
- Conserved Domains (1) summary
-
- cl17011
Location:16 → 246
- Arginase_HDAC; Arginase-like and histone-like hydrolases
-
NM_001166420.2 → NP_001159892.1 histone deacetylase 8 isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks a large portion of the 3' coding region and has a distinct 3' UTR, compared to variant 1. The encoded isoform (5) has a shorter C-terminus, compared to isoform 1.
- Source sequence(s)
-
AI651236, BF514915, BQ189619
- Consensus CDS
-
CCDS55450.1
- UniProtKB/TrEMBL
-
A0A3B3IS93
- Related
- ENSP00000362655.1, ENST00000373554.6
- Conserved Domains (1) summary
-
- cl17011
Location:16 → 146
- Arginase_HDAC; Arginase-like and histone-like hydrolases
-
NM_001166422.2 → NP_001159894.1 histone deacetylase 8 isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks multiple alternate 3' exons and uses an alternate 3' terminal exon, compared to variant 1. The encoded isoform (5) has a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AI651236, AI916593, BP229332
- Consensus CDS
-
CCDS55452.1
- UniProtKB/TrEMBL
-
A0A3B3IS93
- Related
- ENSP00000362657.3, ENST00000373556.8
- Conserved Domains (1) summary
-
- cl17011
Location:16 → 147
- Arginase_HDAC; Arginase-like and histone-like hydrolases
-
NM_001166448.2 → NP_001159920.1 histone deacetylase 8 isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) lacks multiple alternate coding exons and uses an alternate 3' terminal exon, compared to variant 1. The encoded isoform (3) maintains the reading frame, but is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AK074326, BP229332, BQ632790
- Consensus CDS
-
CCDS55448.1
- UniProtKB/Swiss-Prot
-
Q9BY41
- Related
- ENSP00000362660.4, ENST00000373559.8
- Conserved Domains (1) summary
-
- cl17011
Location:16 → 129
- Arginase_HDAC; Arginase-like and histone-like hydrolases
-
NM_001410725.1 → NP_001397654.1 histone deacetylase 8 isoform 7
Status: REVIEWED
- Source sequence(s)
-
AL133500, BX295542
- Consensus CDS
-
CCDS94633.1
- UniProtKB/TrEMBL
- A0A3B3IS68, A0A3B3ISJ4
- Related
- ENSP00000497188.1, ENST00000647886.1
-
NM_001410727.1 → NP_001397656.1 histone deacetylase 8 isoform 8
Status: REVIEWED
- Source sequence(s)
-
AL133500, BX295542
- Consensus CDS
-
CCDS94631.1
- UniProtKB/TrEMBL
- A0A3B3ITZ3, A6NFW1
- Related
- ENSP00000362685.2, ENST00000373583.6
-
NM_001410728.1 → NP_001397657.1 histone deacetylase 8 isoform 9
Status: REVIEWED
- Source sequence(s)
-
AL133500, BX295542
- Consensus CDS
-
CCDS94630.1
- UniProtKB/TrEMBL
-
A0A3B3IT30
- Related
- ENSP00000497568.1, ENST00000647654.1
-
NM_001410729.1 → NP_001397658.1 histone deacetylase 8 isoform 10
Status: REVIEWED
- Source sequence(s)
-
AL133500, BX295542
- Consensus CDS
-
CCDS94634.1
- UniProtKB/TrEMBL
- A0A3B3ISS7, A0A3B3IT95
- Related
- ENSP00000497764.1, ENST00000648834.1
-
NM_001410730.1 → NP_001397659.1 histone deacetylase 8 isoform 11
Status: REVIEWED
- Source sequence(s)
-
AL133500, BX295542
- Consensus CDS
-
CCDS94632.1
- UniProtKB/TrEMBL
- A0A3B3IRZ8, A0A3B3IU01
- Related
- ENSP00000498144.1, ENST00000650126.1
-
NM_018486.3 → NP_060956.1 histone deacetylase 8 isoform 1
See identical proteins and their annotated locations for NP_060956.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AJ277724, BC050433, BP229332
- Consensus CDS
-
CCDS14420.1
- UniProtKB/Swiss-Prot
- A6ND12, A6ND61, A6NET3, A6NJR3, A8MQ62, B4DKN0, B4DV22, Q86VC8, Q9BY41, Q9NP76, Q9NYH4
- UniProtKB/TrEMBL
-
A0A3B3ITZ3
- Related
- ENSP00000362674.3, ENST00000373573.9
- Conserved Domains (1) summary
-
- cd10000
Location:16 → 377
- HDAC8; Histone deacetylase 8 (HDAC8)
RNA
-
NR_051952.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) lacks an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AK298767, BC050433, DC352390
- Related
-
ENST00000650471.1