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    CIZ1 CDKN1A interacting zinc finger protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717725, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CIZ1provided by VGNC
    Official Full Name
    CDKN1A interacting zinc finger protein 1provided by VGNC
    Primary source
    VGNC:VGNC:71184
    See related
    Ensembl:ENSMMUG00000013712
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CIZ1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (12405948..12436948)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (10694119..10720760)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene SWI5 homologous recombination repair protein Neighboring gene golgin A2 Neighboring gene dynamin 1 Neighboring gene microRNA mir-3154 Neighboring gene bublin coiled coil protein Neighboring gene U7 small nuclear RNA Neighboring gene lipocalin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cip1-interacting zinc finger protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      12405948..12436948
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015116750.2 → XP_014972236.1  cip1-interacting zinc finger protein isoform X6

      UniProtKB/TrEMBL
      F6S4C6, G7NFT0
      Related
      ENSMMUP00000018034.3, ENSMMUT00000019257.4
      Conserved Domains (4) summary
      smart00451
      Location:534 → 563
      ZnF_U1; U1-like zinc finger
      COG5112
      Location:608 → 659
      UFD2; U1-like Zn-finger-containing protein [General function prediction only]
      sd00020
      Location:598 → 618
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12171
      Location:628 → 652
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding

    2. XM_028834774.1 → XP_028690607.1  cip1-interacting zinc finger protein isoform X3

      UniProtKB/TrEMBL
      F6S4B3, F6S4F6, G7NFT0
      Related
      ENSMMUP00000018032.4, ENSMMUT00000019255.4
      Conserved Domains (5) summary
      smart00451
      Location:586 → 615
      ZnF_U1; U1-like zinc finger
      PHA03247
      Location:96 → 476
      PHA03247; large tegument protein UL36; Provisional
      sd00020
      Location:650 → 670
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12171
      Location:680 → 704
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
      cl15257
      Location:649 → 716
      GIY-YIG_SF; GIY-YIG nuclease domain superfamily

    3. XM_015116743.2 → XP_014972229.1  cip1-interacting zinc finger protein isoform X1

      UniProtKB/TrEMBL
      G7NFT0
      Related
      ENSMMUP00000018033.4, ENSMMUT00000019256.4
      Conserved Domains (5) summary
      smart00451
      Location:586 → 615
      ZnF_U1; U1-like zinc finger
      PHA03247
      Location:96 → 476
      PHA03247; large tegument protein UL36; Provisional
      sd00020
      Location:650 → 670
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12171
      Location:680 → 704
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
      cl15257
      Location:649 → 716
      GIY-YIG_SF; GIY-YIG nuclease domain superfamily

    4. XM_015116747.2 → XP_014972233.1  cip1-interacting zinc finger protein isoform X2

      UniProtKB/TrEMBL
      G7NFT0
      Conserved Domains (4) summary
      smart00451
      Location:581 → 610
      ZnF_U1; U1-like zinc finger
      COG5112
      Location:655 → 706
      UFD2; U1-like Zn-finger-containing protein [General function prediction only]
      sd00020
      Location:645 → 665
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12171
      Location:675 → 699
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding

    5. XM_001112496.4 → XP_001112496.2  cip1-interacting zinc finger protein isoform X7

      UniProtKB/TrEMBL
      G7NFT0
      Conserved Domains (4) summary
      smart00451
      Location:529 → 558
      ZnF_U1; U1-like zinc finger
      COG5112
      Location:603 → 654
      UFD2; U1-like Zn-finger-containing protein [General function prediction only]
      sd00020
      Location:593 → 613
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12171
      Location:623 → 647
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding

    6. XM_015116748.2 → XP_014972234.1  cip1-interacting zinc finger protein isoform X4

      UniProtKB/TrEMBL
      G7NFT0
      Conserved Domains (4) summary
      smart00451
      Location:562 → 591
      ZnF_U1; U1-like zinc finger
      COG5112
      Location:636 → 687
      UFD2; U1-like Zn-finger-containing protein [General function prediction only]
      sd00020
      Location:626 → 646
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12171
      Location:656 → 680
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding

    7. XM_001112434.4 → XP_001112434.1  cip1-interacting zinc finger protein isoform X8

      UniProtKB/TrEMBL
      G7NFT0
      Conserved Domains (4) summary
      smart00451
      Location:510 → 539
      ZnF_U1; U1-like zinc finger
      COG5112
      Location:584 → 635
      UFD2; U1-like Zn-finger-containing protein [General function prediction only]
      sd00020
      Location:574 → 594
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12171
      Location:604 → 628
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding

    8. XM_015116749.2 → XP_014972235.1  cip1-interacting zinc finger protein isoform X5

      UniProtKB/TrEMBL
      G7NFT0
      Conserved Domains (4) summary
      smart00451
      Location:557 → 586
      ZnF_U1; U1-like zinc finger
      COG5112
      Location:631 → 682
      UFD2; U1-like Zn-finger-containing protein [General function prediction only]
      sd00020
      Location:621 → 641
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12171
      Location:651 → 675
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding

    9. XM_028834773.1 → XP_028690606.1  cip1-interacting zinc finger protein isoform X1

      UniProtKB/TrEMBL
      G7NFT0
      Conserved Domains (5) summary
      smart00451
      Location:586 → 615
      ZnF_U1; U1-like zinc finger
      PHA03247
      Location:96 → 476
      PHA03247; large tegument protein UL36; Provisional
      sd00020
      Location:650 → 670
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12171
      Location:680 → 704
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
      cl15257
      Location:649 → 716
      GIY-YIG_SF; GIY-YIG nuclease domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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