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    KRT80 keratin 80 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697190, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KRT80provided by VGNC
    Official Full Name
    keratin 80provided by VGNC
    Primary source
    VGNC:VGNC:74138
    See related
    Ensembl:ENSMMUG00000010002
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See KRT80 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (51750471..51774496, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (50825168..50850545, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene small integral membrane protein 41 Neighboring gene autophagy related 101 Neighboring gene long intergenic non-protein coding RNA 2874 Neighboring gene methyltransferase-like protein 7A pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of skin epidermis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intermediate filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in keratinization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in keratin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    keratin, type II cytoskeletal 80

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      51750471..51774496 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001091826.4 → XP_001091826.1  keratin, type II cytoskeletal 80 isoform X1

      See identical proteins and their annotated locations for XP_001091826.1

      UniProtKB/TrEMBL
      A0A5F7ZF67, A0A5F8AID4
      Related
      ENSMMUP00000063256.1, ENSMMUT00000099846.1
      Conserved Domains (1) summary
      pfam00038
      Location:82 → 393
      Filament; Intermediate filament protein

    2. XM_001091950.4 → XP_001091950.1  keratin, type II cytoskeletal 80 isoform X2

      See identical proteins and their annotated locations for XP_001091950.1

      UniProtKB/TrEMBL
      A0A5F8AID4
      Conserved Domains (1) summary
      pfam00038
      Location:82 → 393
      Filament; Intermediate filament protein
    Nucleotide Protein
    Heading Accession and Version

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