U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PROX1 prospero homeobox 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709465, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PROX1provided by VGNC
    Official Full Name
    prospero homeobox 1provided by VGNC
    Primary source
    VGNC:VGNC:76427
    Locus tag
    EGK_01663
    See related
    Ensembl:ENSMMUG00000011914
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PROX1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (71447949..71501381)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (152471629..152525033, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase C1 Neighboring gene uncharacterized LOC114680427 Neighboring gene stress response protein NST1-like Neighboring gene SET and MYND domain containing 2 Neighboring gene protein tyrosine phosphatase non-receptor type 14 Neighboring gene keratin, type I cytoskeletal 18 pseudogene

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    prospero homeobox protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260873.1 → NP_001247802.1  prospero homeobox protein 1

      See identical proteins and their annotated locations for NP_001247802.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320932
      UniProtKB/TrEMBL
      A0A5F7ZSJ0, A0A8J8XAF2, F7HMT5, G7MEK6
      Related
      ENSMMUP00000068614.1, ENSMMUT00000106377.1
      Conserved Domains (1) summary
      pfam05044
      Location:579 → 730
      HPD; Homeo-prospero domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      71447949..71501381
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015116188.2 → XP_014971674.1  prospero homeobox protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZSJ0, A0A8J8XAF2, F7HMT5, G7MEK6
      Conserved Domains (1) summary
      pfam05044
      Location:579 → 730
      HPD; Homeo-prospero domain

    2. XM_015116168.2 → XP_014971654.1  prospero homeobox protein 1 isoform X1

      Conserved Domains (1) summary
      pfam05044
      Location:579 → 731
      HPD; Homeo-prospero domain

    3. XM_028843621.1 → XP_028699454.1  prospero homeobox protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A5K1UA47
      Conserved Domains (1) summary
      pfam05044
      Location:579 → 665
      HPD; Homeo-prospero domain

    4. XM_028843615.1 → XP_028699448.1  prospero homeobox protein 1 isoform X1

      Conserved Domains (1) summary
      pfam05044
      Location:579 → 731
      HPD; Homeo-prospero domain

    5. XM_015116181.2 → XP_014971667.1  prospero homeobox protein 1 isoform X1

      Conserved Domains (1) summary
      pfam05044
      Location:579 → 731
      HPD; Homeo-prospero domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.