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    SAP30L SAP30 like [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714400, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SAP30Lprovided by VGNC
    Official Full Name
    SAP30 likeprovided by VGNC
    Primary source
    VGNC:VGNC:77106
    See related
    Ensembl:ENSMMUG00000056369
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SAP30L in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (151854471..151865049)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (152549415..152559993)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678949 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 10 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene vacuolar protein sorting-associated protein 37A pseudogene Neighboring gene heart and neural crest derivatives expressed 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of histone deacetylase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histone deacetylase complex subunit SAP30L

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261790.1 → NP_001248719.1  histone deacetylase complex subunit SAP30L

      See identical proteins and their annotated locations for NP_001248719.1

      Status: PROVISIONAL

      Source sequence(s)
      JV048261
      UniProtKB/TrEMBL
      A0A1D5RKV8, F7BKJ6, H9FZV0
      Related
      ENSMMUP00000013919.4, ENSMMUT00000014856.4
      Conserved Domains (2) summary
      pfam13866
      Location:27 → 96
      zf-SAP30; SAP30 zinc-finger
      pfam13867
      Location:115 → 167
      SAP30_Sin3_bdg; Sin3 binding region of histone deacetylase complex subunit SAP30

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      151854471..151865049
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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