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    DHX40 DEAH-box helicase 40 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715202, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DHX40provided by VGNC
    Official Full Name
    DEAH-box helicase 40provided by VGNC
    Primary source
    VGNC:VGNC:104597
    See related
    Ensembl:ENSMMUG00000063317
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    DXH40
    Orthologs
    human mouse all
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    Genomic context

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    See DHX40 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (37196633..37242001, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (53055399..53100781)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene vacuole membrane protein 1 Neighboring gene peptidyl-tRNA hydrolase 2 Neighboring gene clathrin heavy chain Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC106994073 Neighboring gene uncharacterized LOC114673113

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Form deprivation modulates retinal neurogenesis in primate experimental myopia. Tkatchenko AV, et al. Proc Natl Acad Sci U S A, 2006 Mar 21. PMID 16537371, Free PMC Article
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular anatomical structure IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable ATP-dependent RNA helicase DHX40
    Names
    putative ATP-dependent RNA helicase DHX40

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      37196633..37242001 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015119976.2 → XP_014975462.2  probable ATP-dependent RNA helicase DHX40 isoform X1

      UniProtKB/TrEMBL
      A0A663DEB5, A0A8J8XV02, F7HRA7, G7NHY8
      Related
      ENSMMUP00000029032.4, ENSMMUT00000031016.4
      Conserved Domains (1) summary
      COG1643
      Location:51 → 770
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    2. XM_015119977.2 → XP_014975463.1  probable ATP-dependent RNA helicase DHX40 isoform X3

      Conserved Domains (1) summary
      COG1643
      Location:2 → 631
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    3. XM_015119978.2 → XP_014975464.1  probable ATP-dependent RNA helicase DHX40 isoform X3

      Conserved Domains (1) summary
      COG1643
      Location:2 → 631
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]

    4. XM_015119975.2 → XP_014975461.1  probable ATP-dependent RNA helicase DHX40 isoform X2

      Conserved Domains (1) summary
      COG1643
      Location:1 → 671
      HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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