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    RB1CC1 RB1 inducible coiled-coil 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710330, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RB1CC1provided by VGNC
    Official Full Name
    RB1 inducible coiled-coil 1provided by VGNC
    Primary source
    VGNC:VGNC:76483
    See related
    Ensembl:ENSMMUG00000009990
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RB1CC1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (53224854..53321784, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (48861001..48958995)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene ALK and LTK ligand 1 Neighboring gene uncharacterized LOC106999762 Neighboring gene translation initiation factor IF-2 Neighboring gene hsc70-interacting protein pseudogene Neighboring gene neuropeptides B and W receptor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables molecular adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in autophagy of mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in autophagy of peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in piecemeal microautophagy of the nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in reticulophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Atg1/ULK1 kinase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extrinsic component of membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in phagophore assembly site membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RB1-inducible coiled-coil protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266144.1 → NP_001253073.1  RB1-inducible coiled-coil protein 1

      See identical proteins and their annotated locations for NP_001253073.1

      Status: PROVISIONAL

      Source sequence(s)
      JV527822
      UniProtKB/TrEMBL
      F6QUC5, H9EQW9, I2CTJ3
      Related
      ENSMMUP00000013071.4, ENSMMUT00000013953.4
      Conserved Domains (3) summary
      COG0419
      Location:843 → 1373
      SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
      pfam10377
      Location:1439 → 1588
      ATG11; Autophagy-related protein 11
      cd17060
      Location:2 → 76
      Ubl_RB1CC1; ubiquitin-like (Ubl) domain found in retinoblastoma 1-inducible coiled-coil protein 1 (RB1CC1) and similar proteins

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      53224854..53321784 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015145334.2 → XP_015000820.1  RB1-inducible coiled-coil protein 1 isoform X2

      UniProtKB/TrEMBL
      H9EQX0, I2CTJ4
      Related
      ENSMMUP00000057012.2, ENSMMUT00000055658.2
      Conserved Domains (6) summary
      COG1340
      Location:1000 → 1265
      COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
      pfam10377
      Location:1439 → 1585
      ATG11; Autophagy-related protein 11
      pfam15665
      Location:858 → 1047
      FAM184; Family with sequence similarity 184, A and B
      cl00155
      Location:3 → 77
      UBQ; Ubiquitin-like proteins
      cl02488
      Location:886 → 1059
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      cl23765
      Location:1014 → 1119
      iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits

    2. XM_028852257.1 → XP_028708090.1  RB1-inducible coiled-coil protein 1 isoform X1

      UniProtKB/TrEMBL
      F6QUC5, H9EQW9, I2CTJ3
      Related
      ENSMMUP00000071818.1, ENSMMUT00000097917.1
      Conserved Domains (3) summary
      COG0419
      Location:843 → 1373
      SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
      pfam10377
      Location:1439 → 1588
      ATG11; Autophagy-related protein 11
      cd17060
      Location:2 → 76
      Ubl_RB1CC1; ubiquitin-like (Ubl) domain found in retinoblastoma 1-inducible coiled-coil protein 1 (RB1CC1) and similar proteins

    3. XM_015145335.2 → XP_015000821.1  RB1-inducible coiled-coil protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8A4I4
      Conserved Domains (5) summary
      COG1340
      Location:1000 → 1265
      COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
      pfam15665
      Location:858 → 1047
      FAM184; Family with sequence similarity 184, A and B
      cl00155
      Location:3 → 77
      UBQ; Ubiquitin-like proteins
      cl02488
      Location:886 → 1059
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
      cl23765
      Location:1014 → 1119
      iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials