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    transferases, transferring hexosyl groups [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837736, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transferases, transferring hexosyl groups
    Primary source
    TAIR:AT1G11880
    Locus tag
    AT1G11880
    See related
    Araport:AT1G11880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12F1.28; F12F1_28
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (4007705..4010461, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Seryl-tRNA synthetase Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Synaptobrevin family protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001332008.1
    NM_101059.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables alpha-1,6-mannosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycolipid mannosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    transferases, transferring hexosyl groups
    NP_172652.2
    • transferases, transferring hexosyl groups; FUNCTIONS IN: transferase activity, transferring hexosyl groups; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Mannosyltransferase, PIG-V (InterPro:IPR007315); Has 490 Blast hits to 469 proteins in 237 species: Archae - 6; Bacteria - 111; Metazoa - 123; Fungi - 146; Plants - 40; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4007705..4010461 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332009.1 → NP_001320480.1  transferases, transferring hexosyl groups [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UUE3, A0A1P8AMX4

    2. NM_101059.3 → NP_172652.2  transferases, transferring hexosyl groups [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172652.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O65394, Q6NKT6
      Conserved Domains (1) summary
      pfam04188
      Location:17 → 489
      Mannosyl_trans2; Mannosyltransferase (PIG-V)

    3. NM_001332008.1 → NP_001320479.1  transferases, transferring hexosyl groups [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AMX6
    Nucleotide Protein
    Heading Accession and Version

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