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Conserved domains on  [gi|42561929|ref|NP_172652|]
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transferases, transferring hexosyl groups [Arabidopsis thaliana]

Protein Classification

glycosyltransferase family protein; YfhO family protein( domain architecture ID 10514647)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein| YfhO family protein is an integral membrane protein similar to Bacillus subtilis YfhO that is essential to lipoteichoic acid (LTA) glycosylation

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Mannosyl_trans2 pfam04188
Mannosyltransferase (PIG-V); This is a family of eukaryotic ER membrane proteins that are ...
 17-489 0e+00

Mannosyltransferase (PIG-V); This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI.


:

Pssm-ID: 282094  Cd Length: 439  Bit Score: 571.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929    17 LIKYAIFSRLLVLFLTILWRSLLQPYDTSAALNPPClyhkeDSFPFLVANAASRSLENSVVWDSVYFLRITECGYEYEQT 96
Cdd:pfam04188   4 LTLYAVLFRSLQLLLVFLTPIRQFPTSTSLALNPPC-----SASPSEVNSYWNKYLWNLLSWDSVFFLKISENGYQYEHE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929    97 YAFLPLLPFFISLLSRTVFAPLVPLIGLRAVMVLSGFTVSNLAFIFAAIYLFRVSVIILKDTEASFRASIIFCFNPASIF 176
Cdd:pfam04188  79 YAFSPLWPFFVRLFIKSNNDPLYHLLRLRVAIENSLFYLSILLFFLAAKILSQNIRQSLFARTISFKASLLFCLTPAAGF 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929   177 YSSIYSESLYALFSIGGVYHLLSGTSNVGVLWFALSGCARSNGILNAGYICFQTMHRAYEALYQKRRAYLAMQVFIAGFL 256
Cdd:pfam04188 159 LTSIYSEPLSALFAFVGIWSLECGIDISWVLWFAYSFIMRSNGLASLGRSNCVLLGIYFIDLIELTKNRKFVKAICFPFL 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929   257 RCICICLPFVAFQAYGYYNICHGHTRDEVRPWCKGRIPLLYNFIQSHYWGVGFLKYFQFKQLPNFLLASPILSLAVCSIM 336
Cdd:pfam04188 239 SGSLMFLPFLYFQYYLYKTFCPQRSAGNEPPWCKSQLPLLYSYIQSHYWGVGFLKYWTPKQIPNFLLAVPNIILLIYSSI 318

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929   337 SYMKSRPELFISLGFQATEKEKRSAarlyslkdavepsvktstnegnhdirqrkpssKKDVtgtkvapeksGYLSADVFP 416
Cdd:pfam04188 319 YYSKTHPWLCLTLGLQYPSYNKKAE--------------------------------KPDL----------GFLSPQVFV 356

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929   417 FIVHLSFMVTTAFFIMHVQVATRFLSASPPLYWFASSLIGSPKHSKWGYL----------IWSYCAAYILLGTLLFSNFY 486
Cdd:pfam04188 357 LVVHTRALVVIVCFFMHVQVLTRFLSFLPLHYWFLADLLVSDKKKMWNPLgddkivkfyiYWLACSFYILLGTLLFANFL 436


                  ...
gi 42561929   487 PFT 489
Cdd:pfam04188 437 PPT 439
 
Name Accession Description Interval E-value
Mannosyl_trans2 pfam04188
Mannosyltransferase (PIG-V); This is a family of eukaryotic ER membrane proteins that are ...
 17-489 0e+00

Mannosyltransferase (PIG-V); This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI.


Pssm-ID: 282094  Cd Length: 439  Bit Score: 571.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929    17 LIKYAIFSRLLVLFLTILWRSLLQPYDTSAALNPPClyhkeDSFPFLVANAASRSLENSVVWDSVYFLRITECGYEYEQT 96
Cdd:pfam04188   4 LTLYAVLFRSLQLLLVFLTPIRQFPTSTSLALNPPC-----SASPSEVNSYWNKYLWNLLSWDSVFFLKISENGYQYEHE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929    97 YAFLPLLPFFISLLSRTVFAPLVPLIGLRAVMVLSGFTVSNLAFIFAAIYLFRVSVIILKDTEASFRASIIFCFNPASIF 176
Cdd:pfam04188  79 YAFSPLWPFFVRLFIKSNNDPLYHLLRLRVAIENSLFYLSILLFFLAAKILSQNIRQSLFARTISFKASLLFCLTPAAGF 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929   177 YSSIYSESLYALFSIGGVYHLLSGTSNVGVLWFALSGCARSNGILNAGYICFQTMHRAYEALYQKRRAYLAMQVFIAGFL 256
Cdd:pfam04188 159 LTSIYSEPLSALFAFVGIWSLECGIDISWVLWFAYSFIMRSNGLASLGRSNCVLLGIYFIDLIELTKNRKFVKAICFPFL 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929   257 RCICICLPFVAFQAYGYYNICHGHTRDEVRPWCKGRIPLLYNFIQSHYWGVGFLKYFQFKQLPNFLLASPILSLAVCSIM 336
Cdd:pfam04188 239 SGSLMFLPFLYFQYYLYKTFCPQRSAGNEPPWCKSQLPLLYSYIQSHYWGVGFLKYWTPKQIPNFLLAVPNIILLIYSSI 318

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929   337 SYMKSRPELFISLGFQATEKEKRSAarlyslkdavepsvktstnegnhdirqrkpssKKDVtgtkvapeksGYLSADVFP 416
Cdd:pfam04188 319 YYSKTHPWLCLTLGLQYPSYNKKAE--------------------------------KPDL----------GFLSPQVFV 356

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929   417 FIVHLSFMVTTAFFIMHVQVATRFLSASPPLYWFASSLIGSPKHSKWGYL----------IWSYCAAYILLGTLLFSNFY 486
Cdd:pfam04188 357 LVVHTRALVVIVCFFMHVQVLTRFLSFLPLHYWFLADLLVSDKKKMWNPLgddkivkfyiYWLACSFYILLGTLLFANFL 436


                  ...
gi 42561929   487 PFT 489
Cdd:pfam04188 437 PPT 439
COG5542 COG5542
Mannosyltransferase related to Gpi18 [Carbohydrate transport and metabolism];
76-212 1.91e-14

Mannosyltransferase related to Gpi18 [Carbohydrate transport and metabolism];


Pssm-ID: 444286 [Multi-domain]  Cd Length: 208  Bit Score: 72.29  E-value: 1.91e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929  76 VVWDSVYFLRITECGYEY---EQTYAFLPLLPFFISLLSRTVFAPLVpliglravmvlSGFTVSNLAFIFAAIYLFRVsV 152
Cdd:COG5542   2 TAFLSPWYRAIATSGYFAalgKQFGDYFPLYPYLLRLVMYLGLPFLL-----------AGKLVSILADLVAAYLLYRW-V 69

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 42561929 153 IILKDTEASFRASIIFCFNPASIFYSSIY--SESLYALFSIGGVYHLLSGTSNVGVLWFALS 212
Cdd:COG5542  70 KKYYGGNAALLAAAVLAFLPTVLLNSAIWgqTDSLYTLFSLAALYALLRGRYGWAALFFALA 131
 
Name Accession Description Interval E-value
Mannosyl_trans2 pfam04188
Mannosyltransferase (PIG-V); This is a family of eukaryotic ER membrane proteins that are ...
 17-489 0e+00

Mannosyltransferase (PIG-V); This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI.


Pssm-ID: 282094  Cd Length: 439  Bit Score: 571.47  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929    17 LIKYAIFSRLLVLFLTILWRSLLQPYDTSAALNPPClyhkeDSFPFLVANAASRSLENSVVWDSVYFLRITECGYEYEQT 96
Cdd:pfam04188   4 LTLYAVLFRSLQLLLVFLTPIRQFPTSTSLALNPPC-----SASPSEVNSYWNKYLWNLLSWDSVFFLKISENGYQYEHE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929    97 YAFLPLLPFFISLLSRTVFAPLVPLIGLRAVMVLSGFTVSNLAFIFAAIYLFRVSVIILKDTEASFRASIIFCFNPASIF 176
Cdd:pfam04188  79 YAFSPLWPFFVRLFIKSNNDPLYHLLRLRVAIENSLFYLSILLFFLAAKILSQNIRQSLFARTISFKASLLFCLTPAAGF 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929   177 YSSIYSESLYALFSIGGVYHLLSGTSNVGVLWFALSGCARSNGILNAGYICFQTMHRAYEALYQKRRAYLAMQVFIAGFL 256
Cdd:pfam04188 159 LTSIYSEPLSALFAFVGIWSLECGIDISWVLWFAYSFIMRSNGLASLGRSNCVLLGIYFIDLIELTKNRKFVKAICFPFL 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929   257 RCICICLPFVAFQAYGYYNICHGHTRDEVRPWCKGRIPLLYNFIQSHYWGVGFLKYFQFKQLPNFLLASPILSLAVCSIM 336
Cdd:pfam04188 239 SGSLMFLPFLYFQYYLYKTFCPQRSAGNEPPWCKSQLPLLYSYIQSHYWGVGFLKYWTPKQIPNFLLAVPNIILLIYSSI 318

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929   337 SYMKSRPELFISLGFQATEKEKRSAarlyslkdavepsvktstnegnhdirqrkpssKKDVtgtkvapeksGYLSADVFP 416
Cdd:pfam04188 319 YYSKTHPWLCLTLGLQYPSYNKKAE--------------------------------KPDL----------GFLSPQVFV 356

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929   417 FIVHLSFMVTTAFFIMHVQVATRFLSASPPLYWFASSLIGSPKHSKWGYL----------IWSYCAAYILLGTLLFSNFY 486
Cdd:pfam04188 357 LVVHTRALVVIVCFFMHVQVLTRFLSFLPLHYWFLADLLVSDKKKMWNPLgddkivkfyiYWLACSFYILLGTLLFANFL 436


                  ...
gi 42561929   487 PFT 489
Cdd:pfam04188 437 PPT 439
COG5542 COG5542
Mannosyltransferase related to Gpi18 [Carbohydrate transport and metabolism];
76-212 1.91e-14

Mannosyltransferase related to Gpi18 [Carbohydrate transport and metabolism];


Pssm-ID: 444286 [Multi-domain]  Cd Length: 208  Bit Score: 72.29  E-value: 1.91e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 42561929  76 VVWDSVYFLRITECGYEY---EQTYAFLPLLPFFISLLSRTVFAPLVpliglravmvlSGFTVSNLAFIFAAIYLFRVsV 152
Cdd:COG5542   2 TAFLSPWYRAIATSGYFAalgKQFGDYFPLYPYLLRLVMYLGLPFLL-----------AGKLVSILADLVAAYLLYRW-V 69

                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 42561929 153 IILKDTEASFRASIIFCFNPASIFYSSIY--SESLYALFSIGGVYHLLSGTSNVGVLWFALS 212
Cdd:COG5542  70 KKYYGGNAALLAAAVLAFLPTVLLNSAIWgqTDSLYTLFSLAALYALLRGRYGWAALFFALA 131
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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