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    ARAD1 Exostosin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818076, updated on 18-Sep-2024

    Summary

    Official Symbol
    ARAD1
    Official Full Name
    Exostosin family protein
    Primary source
    TAIR:AT2G35100
    Locus tag
    AT2G35100
    See related
    Araport:AT2G35100
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABINAN DEFICIENT 1; ARABINOSYLTRANSFERASE; T4C15.23; T4C15_23
    Summary
    Putative glycosyltransferase, similar to other CAZy Family 47 proteins. The protein is predicted to be a type 2 membrane protein with a signal anchor and is predicted to be targeted to the secretory pathway and to have a single transmembrane helix near the N terminus; hence, the protein has the features expected for a type II membrane protein targeted to the Golgi vesicles. The gene was shown to be expressed in all tissues but particularly in vascular tissues of leaves and stems.
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    Genomic context

    See ARAD1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (14793567..14795701, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein Neighboring gene transmembrane protein, putative (DUF1640) Neighboring gene transcription activator Neighboring gene Single hybrid motif superfamily protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    General gene information

    NM_179910.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity PubMed 
    enables protein binding PubMed 

    General protein information

    Preferred Names
    Exostosin family protein
    NP_850241.1
    • ARABINAN DEFICIENT 1 (ARAD1); FUNCTIONS IN: transferase activity, transferring glycosyl groups, catalytic activity; INVOLVED IN: pectin biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G44930.2); Has 1290 Blast hits to 1285 proteins in 106 species: Archae - 0; Bacteria - 8; Metazoa - 193; Fungi - 4; Plants - 1016; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14793567..14795701 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179910.3 → NP_850241.1  Exostosin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850241.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82181, Q6DBG8
      UniProtKB/TrEMBL
      A0A178VSN1, A0A5S9X4B1
      Conserved Domains (1) summary
      pfam03016
      Location:56 → 368
      Exostosin; Exostosin family
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