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ARAD2 Exostosin family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834523, updated on 18-Sep-2024

Summary

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Official Symbol
ARAD2
Official Full Name
Exostosin family protein
Primary source
TAIR:AT5G44930
Locus tag
AT5G44930
See related
Araport:AT5G44930
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABINAN DEFICIENT 2; ARABINOSYLTRANSFERASE; K21C13.11; K21C13_11
Summary
Encodes a putative arabinosyltransferase that is associated with arabinan biosynthesis and is not redundant with ARAD1. The two glycosyltransferases may function in complexes held together by disulfide bridges.
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Genomic context

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See ARAD2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (18138775..18142159, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Toll-Interleukin-Resistance (TIR) domain family protein Neighboring gene Toll-Interleukin-Resistance (TIR) domain family protein Neighboring gene Toll-Interleukin-Resistance (TIR) domain family protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cell wall pectic arabinans influence the mechanical properties of Arabidopsis thaliana inflorescence stems and their response to mechanical stress. Verhertbruggen Y, et al. Plant Cell Physiol, 2013 Aug. PMID 23695504
  2. ARAD proteins associated with pectic Arabinan biosynthesis form complexes when transiently overexpressed in planta. Harholt J, et al. Planta, 2012 Jul. PMID 22270560
  3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Arabinan deficient (arad) mutants display an altered response to mechanical stress in terms of inflorescence stem length reduction.
    Title: Cell wall pectic arabinans influence the mechanical properties of Arabidopsis thaliana inflorescence stems and their response to mechanical stress.
  2. These data show that ARAD2 is associated with arabinan biosynthesis, not redundant with ARAD1, and that the two glycosyltransferases may function in complexes held together by disulfide bridges in Arabidopsis thaliana.
    Title: ARAD proteins associated with pectic Arabinan biosynthesis form complexes when transiently overexpressed in planta.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001344577.1
NM_123861.3
NM_180801.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within arabinan biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within plant-type cell wall biogenesis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Exostosin family protein
NP_199306.1
  • ARABINAN DEFICIENT 2 (ARAD2); FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1289 Blast hits to 1285 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 4; Plants - 990; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
NP_851132.1
  • ARABINAN DEFICIENT 2 (ARAD2); FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263); BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G35100.1); Has 1289 Blast hits to 1285 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 246; Fungi - 4; Plants - 990; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    18138775..18142159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_180801.2 → NP_851132.1  Exostosin family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_851132.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FLA5
    UniProtKB/TrEMBL
    A0A178UFZ9
    Conserved Domains (1) summary
    pfam03016
    Location:66 → 364
    Exostosin; Exostosin family

  2. NM_123861.3 → NP_199306.1  Exostosin family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199306.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FLA5
    UniProtKB/TrEMBL
    A0A178UFZ9
    Conserved Domains (1) summary
    pfam03016
    Location:66 → 364
    Exostosin; Exostosin family

  3. NM_001344577.1 → NP_001331586.1  Exostosin family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UFZ9, A0A1P8BEB5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FLA5.1

Gene LinkOut

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