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    hepatocyte growth factor activator, putative (DUF3527) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836019, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hepatocyte growth factor activator, putative (DUF3527)
    Primary source
    TAIR:AT5G59020
    Locus tag
    AT5G59020
    See related
    Araport:AT5G59020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K19M22.16; K19M22_16
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (23826744..23830520, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene RING/FYVE/PHD zinc finger superfamily protein Neighboring gene kinase with tetratricopeptide repeat domain-containing protein Neighboring gene ncRNA Neighboring gene copper transporter 1 Neighboring gene copper transporter 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_125292.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hepatocyte growth factor activator, putative (DUF3527)
    NP_200710.1
    • Protein of unknown function (DUF3527); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT2G29510.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      23826744..23830520 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125292.4 → NP_200710.1  hepatocyte growth factor activator, putative (DUF3527) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200710.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UEA5, A0A5S9YFD0, A0A654GCA5, Q9FGU9
      Conserved Domains (1) summary
      pfam12043
      Location:456 → 727
      DUF3527; Domain of unknown function (DUF3527)
    Nucleotide Protein
    Heading Accession and Version

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