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    DUF1685 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818876, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DUF1685 family protein
    Primary source
    TAIR:AT2G42760
    Locus tag
    AT2G42760
    See related
    Araport:AT2G42760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7D19.24; F7D19_24
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (17795817..17797413, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein large subunit 16A Neighboring gene DNAJ heat shock N-terminal domain-containing protein Neighboring gene Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein Neighboring gene transcription elongation factor B polypeptide

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_129837.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DUF1685 family protein
    NP_181804.1
    • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881); Has 170 Blast hits to 164 proteins in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26; Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17795817..17797413 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129837.4 → NP_181804.1  DUF1685 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181804.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VYS1, A0A5S9X6G8, A0A654F2N9, Q9SJI0
      Conserved Domains (1) summary
      pfam07939
      Location:149 → 182
      DUF1685; Protein of unknown function (DUF1685)
    Nucleotide Protein
    Heading Accession and Version

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