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Conserved domains on  [gi|15227995|ref|NP_181804|]
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DUF1685 family protein [Arabidopsis thaliana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1685 super family cl06811
Protein of unknown function (DUF1685); The members of this family are hypothetical eukaryotic ...
 149-182 2.57e-03

Protein of unknown function (DUF1685); The members of this family are hypothetical eukaryotic proteins of unknown function. The region in question is approximately 100 amino acid residues long.


The actual alignment was detected with superfamily member pfam07939:

Pssm-ID: 462321  Cd Length: 59  Bit Score: 35.28  E-value: 2.57e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 15227995   149 DLEyeELKGFMDLGFVFSEDDhKDSDLVSILPGL 182
Cdd:pfam07939   5 DLD--ELKGCIELGFGFDSSD-EDPRLCDTLPAL 35
 
Name Accession Description Interval E-value
DUF1685 pfam07939
Protein of unknown function (DUF1685); The members of this family are hypothetical eukaryotic ...
 149-182 2.57e-03

Protein of unknown function (DUF1685); The members of this family are hypothetical eukaryotic proteins of unknown function. The region in question is approximately 100 amino acid residues long.


Pssm-ID: 462321  Cd Length: 59  Bit Score: 35.28  E-value: 2.57e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 15227995   149 DLEyeELKGFMDLGFVFSEDDhKDSDLVSILPGL 182
Cdd:pfam07939   5 DLD--ELKGCIELGFGFDSSD-EDPRLCDTLPAL 35
 
Name Accession Description Interval E-value
DUF1685 pfam07939
Protein of unknown function (DUF1685); The members of this family are hypothetical eukaryotic ...
 149-182 2.57e-03

Protein of unknown function (DUF1685); The members of this family are hypothetical eukaryotic proteins of unknown function. The region in question is approximately 100 amino acid residues long.


Pssm-ID: 462321  Cd Length: 59  Bit Score: 35.28  E-value: 2.57e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 15227995   149 DLEyeELKGFMDLGFVFSEDDhKDSDLVSILPGL 182
Cdd:pfam07939   5 DLD--ELKGCIELGFGFDSSD-EDPRLCDTLPAL 35
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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