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    GLIP3 GDSL-motif lipase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841837, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GLIP3
    Official Full Name
    GDSL-motif lipase 3
    Primary source
    TAIR:AT1G53990
    Locus tag
    AT1G53990
    See related
    Araport:AT1G53990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15I1.7; F15I1_7; GDSL-motif lipase 3
    Summary
    Contains lipase signature motif and GDSL domain.
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    Genomic context

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    See GLIP3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (20151016..20152752)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ubiquitin-40S ribosomal S27a-like protein Neighboring gene GDSL esterase/lipase-like protein Neighboring gene Ubiquitin-like superfamily protein Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Secretome analysis reveals an Arabidopsis lipase involved in defense against Alternaria brassicicola. Oh IS, et al. Plant Cell, 2005 Oct. PMID 16126835, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables lipase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    GDSL-motif lipase 3
    NP_175801.1
    • GDSL-motif lipase 3 (GLIP3); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Lipase, GDSL, active site (InterPro:IPR008265), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: GDSL lipase 1 (TAIR:AT5G40990.1); Has 3198 Blast hits to 3161 proteins in 128 species: Archae - 0; Bacteria - 127; Metazoa - 0; Fungi - 51; Plants - 3003; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      20151016..20152752
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104276.1 → NP_175801.1  GDSL-motif lipase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175801.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SYF5
      UniProtKB/TrEMBL
      A0A654ENB8
      Conserved Domains (1) summary
      cd01837
      Location:35 → 349
      SGNH_plant_lipase_like; SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SYF5.2

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